KEGG   Rhincodon typus (whale shark): 109919459
Entry
109919459         CDS       T06055                                 
Symbol
plod1a
Name
(RefSeq) procollagen-lysine,2-oxoglutarate 5-dioxygenase 1 isoform X2
  KO
K00473  procollagen-lysine,2-oxoglutarate 5-dioxygenase 1 [EC:1.14.11.4]
Organism
rtp  Rhincodon typus (whale shark)
Pathway
rtp00310  Lysine degradation
rtp01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:rtp00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00310 Lysine degradation
    109919459 (plod1a)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:rtp04147]
    109919459 (plod1a)
Enzymes [BR:rtp01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.4  procollagen-lysine 5-dioxygenase
     109919459 (plod1a)
Exosome [BR:rtp04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   109919459 (plod1a)
SSDB
Motif
Pfam: GT_PLOD 2OG-FeII_Oxy OGFOD2-like Anp1 2OG-FeII_Oxy_3
Other DBs
NCBI-GeneID: 109919459
NCBI-ProteinID: XP_020375061
LinkDB
Position
31:complement(18064895..18094409)
AA seq 740 aa
MDCVRRVCSLFLILPVLILTSQFRVCKSETRKNPVPKENLLVFTVATKETDGFMRFMRSA
NFFNYTVKVLGLGEEWTGGDVTKSSGGGQKVRILKQALKSYATEKELVILFVDSYDVIFA
SGPEELLKKFHQAKHNVVFSAEAFIWPNHHLEVQYPHVREGKRFLNSGGFIGFAPNIYEL
VEPWDLEDKHDDQLFYTKTYLDPKKRASLNITLDHKCRIFQNLNGALDEVVLKFEDKRVR
ARNMEYNSLPVIIHGNGPTKMQLNYMGNYIPKVWTFETGCTECDKDTISLAEKKDSEFPT
VFIGIFIEQLTPFVEDFFERLVNLSYPKKQLQIFIHNTQNHHEQHVWQFVEEHGDKYQTV
KVVGPDEEIANADARNMGIDLCRQDVTCDYYFSVDVEVVLLNHDILKLLIEQNRPILAPL
VSRHKKLWSNFWGALDVDGYYARSEDYVDIVQQRRIGLWNVPYISSVYLIQGTLLQSVLT
EKDLYHAGSLDTDMAFCHNIREQGIFMYITNRHEFGRILSVANYHTDHLHNDLWQISENP
QDWEDKYIHENYSSIMENKILLQPCPDVYWFPIFTERACDDIVEEMEHYGQWSTGDNKDI
RIQGGYENVPTIDIHMNQIGYEKEWQKFLREYIAPLTEKIYPGYYTKALFDLAFVVRYKP
DEQPSLMPHHDASTFTVNIALNKVGVDYQGGGCRFIRYNCSIQAPRKGWALMHPGRLTHY
HEGLPTTSGTRYIAVSFVDP
NT seq 2223 nt   +upstreamnt  +downstreamnt
atggattgcgttcgaagagtttgctcattgtttctgatcctaccggtcctgattttaacc
tcccaatttcgcgtttgtaaaagtgaaactcggaaaaatccggttccgaaagaaaatctc
ttggttttcactgttgccacaaaagaaacagatggcttcatgcgattcatgagatctgca
aacttcttcaattacacggttaaggtgttgggtttgggtgaggagtggacaggtggagac
gtgacaaaatcctcaggaggcgggcagaaagtacggattctgaagcaagccttgaaatca
tatgccacagagaaggaactggttattctgtttgtggacagctatgatgtgatatttgct
tcagggcctgaagaattactaaagaagtttcatcaggctaagcacaatgtggtcttttct
gctgaggcttttatttggcccaatcaccatcttgaagtccagtaccctcatgtaagggag
ggcaaacgattcctcaattccggaggatttattggctttgctccgaatatttacgaactt
gtggaaccctgggatctagaggacaagcatgatgatcaactcttttacacaaaaacatat
ctggatccgaagaagagggcaagtttgaatattaccttggaccacaaatgtcggatattc
cagaatttaaatggagcacttgatgaagtggttctgaagtttgaagataagcgagtaaga
gcacgaaacatggagtataattcattgccagtcatcatccatggaaatggtcccacaaag
atgcagctgaactatatggggaactacattccgaaggtctggacctttgaaactggctgc
acagaatgtgataaagacacaataagtttagcagaaaagaaggacagtgaattccctact
gtgttcattggaatcttcattgagcagctgacaccctttgtagaggatttctttgagcgt
ttagtgaatttgagttatccaaagaagcaactccaaatcttcattcacaatacacaaaac
caccatgagcagcatgtgtggcagtttgtggaggaacatggggacaagtaccagactgtg
aaagtagttggacctgatgaggagattgccaatgcagatgctcgcaacatggggattgac
ctgtgccggcaagatgtgacatgtgattattacttcagtgttgacgttgaagttgtacta
ctgaatcatgacatcctgaaactcctcattgaacagaacagaccaatactggcacctctg
gtcagtcgccacaagaagctgtggtctaacttctggggggcacttgatgttgatggatat
tatgcccgatcagaggattatgtggatattgttcagcaacgcagaattggcctctggaat
gttccatacatctccagtgtatacctaatccaaggcactttgcttcaatcggtcctaact
gagaaagatctctaccatgctggcagcttggacacagacatggctttctgtcacaatatc
agggaacagggaatcttcatgtacatcaccaacaggcatgaatttggacgcattctctcc
gtggcaaattatcatactgatcacctgcacaatgacctgtggcagatctctgaaaaccca
caggattgggaagacaagtacattcatgagaactacagctcaataatggaaaacaagatc
cttctacagccttgtccagacgtatactggttccctattttcactgaacgagcctgtgat
gacattgttgaggagatggagcattatggacagtggtcaactggagacaataaggacata
cgtattcagggtggatatgaaaatgtgccaacaattgatattcacatgaatcagattgga
tatgagaaagaatggcagaagtttttaagagaatatattgcacctttaacagaaaagatc
tacccaggctactacaccaaggctctctttgacctggcctttgtagttagatataaacct
gatgaacagccatctttaatgccacatcatgatgcttctacttttactgtaaacattgca
ctcaacaaggttggagttgactatcagggaggtggctgcaggttcatcaggtataactgt
tccatccaggctcctcggaagggctgggccctcatgcatccagggcgattgacccattac
cacgagggtcttccaacgaccagtggcacaagatacatcgctgtctcttttgttgaccct
taa

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