Rhincodon typus (whale shark): 109919463
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Entry
109919463 CDS
T06055
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase CYLD-like isoform X4
KO
K08601
ubiquitin carboxyl-terminal hydrolase CYLD [EC:
3.4.19.12
]
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp04217
Necroptosis
rtp04622
RIG-I-like receptor signaling pathway
rtp04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
109919463
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
109919463
04625 C-type lectin receptor signaling pathway
109919463
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
rtp01002
]
109919463
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rtp04121
]
109919463
Enzymes [BR:
rtp01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
109919463
Peptidases and inhibitors [BR:
rtp01002
]
Cysteine peptidases
Family C67
109919463
Ubiquitin system [BR:
rtp04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
109919463
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CAP_GLY
UCH
zf-HIT
ThiJ_like
Motif
Other DBs
NCBI-GeneID:
109919463
NCBI-ProteinID:
XP_020375066
LinkDB
All DBs
Position
19:11390608..11418018
Genome browser
AA seq
723 aa
AA seq
DB search
MGGIEKDRHYFIVMKEFTDSKKKIQKGLLGYFTRSENGELSAVVELNKKTIKLTKVKQED
VQKISKDEAELLLEIQDMSHRCALVQNENLFKSISILQINDIVQVKGAKETWVGIVKNII
NSKRDNGLKLNGTLFQVESVEGEDHKTKGRKNVKHTLINAGDITCASNTKVGPSHSDDKE
NKLYSDDAENWNKSPVGSQSPSLSPRKTGREKSDEVSTSAHLKISKHYSSKTFNSTLSIP
GQKLTESDSSALEVESMVEVKLPNNAIVYGVIRWIGIPEGHDSLWAGIELDYELNNASDG
TFEKNRYFCCEQNKATFIPLRNCKPDARFSSNVLKEVVNSPVPASVKTIQDNLAVQEDVP
PVREAEALQLMKGRMKGIQGHHNSCYLDSTIFSLFAFTTVVDSILHMPGGHDEKIQRVLR
EDIVNPLRKTGVVNADKVTKLRKLLGCDTFISAEKDPEEFINILLHEVLAVDPLLKIRSG
QKIQESYCYQIILERDEKLTVPTVQLLLERSFLSCDLKFEEIPSCLLIQMPRFGKEFKMF
PKIMPSLELDITDLLSNTLRQCFICGEVAEYECAQCLLDPTLNPGAIKQYCFTCNKQVHF
HKERKDHQFRKFPYPRDISARSPFPQHRMELFAVLCIETSHYVSFVKYGPSKHSWLFFDS
MADRIGDENIPEITDCPQIGDYLLMSEDKLAYTDLKQLDGFAKRLFCDAYMCMYQSPRMC
LYK
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atgggaggaattgaaaaagatagacattattttattgtgatgaaagaatttactgacagc
aagaagaagatccaaaaaggcttattgggctatttcaccaggtcagaaaatggggaatta
tctgcagttgtggagcttaacaagaagaccataaaattaacaaaagtgaagcaagaagat
gtccaaaaaatcagcaaggatgaagcagagttgcttcttgaaatccaggacatgtctcat
cgatgtgcacttgttcagaatgaaaatcttttcaaatctatttctatcctacaaattaat
gacattgtgcaagtgaaaggggccaaggaaacatgggtaggaattgtcaaaaatattata
aactctaaacgtgacaatggattgaaactaaatggaacattgtttcaagtcgagagtgtg
gagggagaagaccataaaacgaaggggaggaaaaacgtcaaacacactttaattaatgca
ggggatatcacttgcgcaagtaatactaaagtgggaccatctcattcagatgataaagag
aataaattatacagtgatgatgcagaaaactggaacaagtccccagttggaagtcagtct
ccaagcttatcacccaggaaaacgggcagagaaaaatcagatgaagtttcaacctcagct
catttaaagatttctaaacactacagttccaaaactttcaactctaccctatccattcct
ggtcaaaaacttacggagagtgacagtagtgctctagaggttgagtcaatggtggaagta
aaattgcctaataatgctatagtctatggagttatcagatggattggtataccggaaggt
cacgacagtttgtgggcgggaattgagttggactatgaactaaacaatgcgagcgatgga
acgtttgagaaaaatcgttatttttgttgtgaacagaacaaagcaacttttataccatta
aggaactgtaaacctgacgcccgcttttcatcaaacgtactgaaggaggtagtcaacagt
ccagttcctgcatcagtgaagaccattcaagataacctggccgtacaagaggatgttcct
ccagtgcgagaagctgaagcactacagcttatgaaaggaagaatgaaagggattcaggga
caccacaattcttgctatctggactccacaatttttagcttgttcgcattcacgacagtg
gtagatagtatacttcacatgcctggaggacacgatgagaaaattcaacgtgtactgagg
gaggatatagtcaacccacttcgcaagactggagttgtgaatgcagataaagtgacaaaa
ttaaggaaactattaggatgtgacacgtttatttcggcagagaaagatccagaagaattc
atcaatatcctattgcatgaagtgctggcagttgatccattgctaaagatcaggtcaggc
cagaaaattcaagagagctactgttatcagataatcctggagagagacgagaaactgacc
gtaccaacggtacagttgcttctggagaggtcctttctctcttgtgacttaaaatttgag
gagatcccatcgtgcctgttgattcagatgccacggtttggaaaagagtttaaaatgttc
ccaaagattatgccctcattggaactagatatcacagatttacttagtaacactctgaga
cagtgcttcatatgtggagaagtggcagagtatgaatgtgctcagtgtcttctggaccca
acacttaatccaggtgccataaaacaatactgcttcacttgcaataaacaggttcatttc
cataaggagaggaaggatcaccaattcagaaaatttccatatccaagagacatttctgcc
agatccccttttccacaacacaggatggaactgtttgcagtgctttgcattgaaaccagc
cattatgtttcatttgtgaaatatgggcccagcaaacattcctggcttttctttgacagt
atggctgatcgaattggtgatgagaatattccagagataacggattgtccacaaataggt
gattacctgctgatgtcagaggacaagctggcttatacggacctgaagcagcttgatgga
tttgcaaagagacttttctgtgatgcctatatgtgcatgtatcaaagccctaggatgtgc
ttgtataagtga
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integrated database retrieval system
