Rhincodon typus (whale shark): 109919473
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Entry
109919473 CDS
T06055
Symbol
pif1
Name
(RefSeq) ATP-dependent DNA helicase PIF1
KO
K15255
ATP-dependent DNA helicase PIF1 [EC:
5.6.2.3
]
Organism
rtp
Rhincodon typus (whale shark)
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rtp03032
]
109919473 (pif1)
03029 Mitochondrial biogenesis [BR:
rtp03029
]
109919473 (pif1)
Enzymes [BR:
rtp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
109919473 (pif1)
DNA replication proteins [BR:
rtp03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
109919473 (pif1)
Mitochondrial biogenesis [BR:
rtp03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial DNA replication factors
Mitochondrial DNA maintenance factors
109919473 (pif1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PIF1
Pif1_2B_dom
AAA_30
AAA_19
AAA_22
Herpes_Helicase
UvrD_C_2
Mg_chelatase
ABC_tran
PhoH
RsgA_GTPase
AAA_7
AAA_5
AAA_16
Motif
Other DBs
NCBI-GeneID:
109919473
NCBI-ProteinID:
XP_020375077
LinkDB
All DBs
Position
10:complement(56012555..56046303)
Genome browser
AA seq
644 aa
AA seq
DB search
MLSASSGAEVQCSVTIEYLNTASQATKRKTVRNAIITLGRNEFRDILVRVHDGKLSQSFI
LREIQLFTQFIRDGKSSIKLIPDNIQILVSNCPPDKLKVFFKTLSIKYAADKKASKPVSE
RARLRSTLPRTFDTISPVQVQDVKRANGLESHGTVRTPISTKGLKDRINNMGPSRHTKRP
RSISSENRPDTELKSAKKPILSMPSGRKLTKEQSHILSTILKGKNIFFTGSAGTGKSFLL
KRIVGALPPKSTYATASTGVAACHIGGTTLHAFAGIGSGKAPLQQCVELAQRSGIIRHWQ
NCRHLIIDEISMVEGEFFDKLEAVARIVRKCDEPFGGIQLIVCGDFLQLPPVSRNKEKYK
FCFQAKSWQKCIQVNMELTEVRRQTDKKFIAILQSIRLGRCPEEVAVQLINTANQKIDRD
GILATQLCTHKDDVELTNKHRLQQLPGELHTYQAIDSDPMFVQTLNAQCPAGQTLQLKKG
AQVMLTRNLDIDKGMVNGARGVVIGFESGNIPLPQVRFLCGVTATIKPERWMVKGLGGSY
LTRHQLPLKLAWAISIHKSQGMSLDCVEISLARVFESGQAYVALSRARSLEGLRVMDFDR
RVVHANTDVLSFYSRLKKERILMQSSLDGYIETENQENKMPRRL
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
atgctgtctgcctcttcaggtgctgaggttcagtgcagtgttacaattgaatacctcaac
actgctagccaggcgaccaagcgcaaaactgttcgcaatgccattatcaccctcggacgc
aatgaattccgtgatatccttgttcgggtgcacgacggcaagctgtcgcaaagctttatc
ctgcgtgaaatccaacttttcacacagtttattcgggatgggaagagttccatcaaactg
attccagataatattcagatcctagtttcgaactgtccaccagataagctaaaagtgttc
tttaaaactctttccatcaaatacgcagcagataagaaggccagcaaaccagtcagtgag
cgagcccggctgcgatccacactcccccggacatttgatacaatcagccctgtgcaagta
caggacgtgaaaagggctaacgggcttgaatcgcatggaactgtgcgaacaccaatttca
accaaggggctgaaggatcgaataaacaacatggggccaagcaggcacacaaagcgaccc
cggagcatctcatcggaaaaccgtccggacactgagctaaagtctgccaaaaagcccatc
ttgtcgatgccaagtggacggaagctgacaaaggaacagtcacacatccttagcacgatc
ctgaaaggaaagaatatcttcttcactggaagtgctggaactgggaaatcttttttactg
aagagaattgtgggagcattaccaccaaaaagcacctatgccacagcgagtactggagtg
gctgcctgtcacattggaggaacgactctccatgcatttgcaggaattggttcaggaaaa
gctcccttacaacaatgtgtagagctggctcagagatctgggattataagacactggcaa
aactgcagacatcttatcatagatgaaatctccatggtagaaggagaattctttgacaaa
cttgaagcagtggccaggattgttcgtaaatgtgatgagccatttggtggaatccagctg
atagtttgtggagattttctacaacttcctcctgtgtcccgaaacaaagaaaaatacaaa
ttttgcttccaggctaagagttggcagaaatgtatccaggtaaatatggaactaacggag
gtccgaagacaaactgataaaaagttcattgcaatattgcagtctattcgtcttgggaga
tgtccagaagaagttgctgtccagttgatcaacacagccaaccaaaaaattgaccgggat
ggaatcttagcaacacagctttgcacacacaaggatgatgtggaattaactaataagcac
aggctccagcaattaccaggggaattgcatacatatcaagctattgacagcgatcccatg
tttgtacaaacattaaatgcccaatgtcctgcaggtcagacactgcagctgaagaaaggg
gcacaggtgatgctgactagaaatctggacatagacaagggaatggtaaatggtgctcga
ggagttgtcattggctttgaatctggaaacataccccttccccaagtcagatttttgtgc
ggtgtaacggcgacgataaagccagaacgttggatggttaaaggtttaggtggatcctac
ctgacgagacatcagctgcctttgaagttagcctgggccatctccattcacaagagtcag
ggcatgtcattagactgtgtggagatctcactcgcacgcgtattcgaaagcgggcaggca
tatgtggcgctgtctcgtgctcgaagcttggaaggtcttcgagtgatggactttgacagg
agagtggtccatgctaacacggacgtcctgagtttttatagcagattaaaaaaggaaagg
atcctgatgcagtcttcactggatggttacattgaaacagaaaatcaggaaaacaagatg
cctagaagactatag
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