Rhincodon typus (whale shark): 109919490
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Entry
109919490 CDS
T06055
Symbol
atf4a
Name
(RefSeq) cyclic AMP-dependent transcription factor ATF-4
KO
K04374
cyclic AMP-dependent transcription factor ATF-4
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp04010
MAPK signaling pathway
rtp04137
Mitophagy - animal
rtp04141
Protein processing in endoplasmic reticulum
rtp04156
Integrated stress response (ISR) signaling pathway
rtp04210
Apoptosis
rtp04261
Adrenergic signaling in cardiomyocytes
rtp04912
GnRH signaling pathway
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
109919490 (atf4a)
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
109919490 (atf4a)
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
109919490 (atf4a)
09143 Cell growth and death
04210 Apoptosis
109919490 (atf4a)
04156 Integrated stress response (ISR) signaling pathway
109919490 (atf4a)
09150 Organismal Systems
09152 Endocrine system
04912 GnRH signaling pathway
109919490 (atf4a)
09153 Circulatory system
04261 Adrenergic signaling in cardiomyocytes
109919490 (atf4a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rtp03000
]
109919490 (atf4a)
Transcription factors [BR:
rtp03000
]
Eukaryotic type
Basic leucine zipper (bZIP)
AP-1(-like) components, CRE-BP/ATF
109919490 (atf4a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
bZIP_1
bZIP_2
CEP89
AIP3
FNIP_N
NAM-associated
HisKA
DUF6278
bZIP_Maf
ATG16
Motif
Other DBs
NCBI-GeneID:
109919490
NCBI-ProteinID:
XP_020375100
LinkDB
All DBs
Position
37:complement(7862559..7865562)
Genome browser
AA seq
353 aa
AA seq
DB search
MTSDWPDSFSSLMEDFMMSPSSPFLTAEGDPCLLHTDLAEAGPVKSYLRPLLFGGNEESD
VSSLITRDTLLDTDDTVEDAFTGFDWMEKTDLFDNLFMGENGSPSSEELLAVLDSSCVLE
ELPFDPLPAKLQVADLGLSSDHRPFPNSPPGSDQLAPSTPTITPESLISTPDHLLHFLEN
ETGVSGGEEFTQSWSLQDSVKEEDDRLMLDSDSGVGTSPPHSPAESSDRSMSEGSPQTSG
LSSDDSSPIRPKPYDRPSTENVGSLSKVKVSSVESRGLEKKLKKMEQNKSAATRYRQKKR
AEHGAILAECSLLEEKNKNLQEKADSLVKEIQYLKDLIEEVRKAKSSRSAKGL
NT seq
1062 nt
NT seq
+upstream
nt +downstream
nt
atgacttcagattggccagattctttctcttccctgatggaggacttcatgatgtccccg
agttcgccgtttctgacggctgaaggggacccgtgtctcctgcacacagacctggcggag
gccgggccggtgaaatcgtacctcagaccactcctgtttggtggcaatgaggaaagcgat
gtgtcctccctgatcactcgtgacacgttactggacaccgacgatactgtggaggatgcg
ttcaccggcttcgactggatggagaagacggatctctttgacaatttgtttatgggtgaa
aatggctctccctcctcagaggagctgttggctgtcttggacagttcctgtgttctggaa
gaattgccttttgatcctttgccagctaaactacaagtagctgaccttggcttgagttct
gatcacaggccatttccaaattcacccccagggtcagatcagctggcacctagtacccca
accattaccccagaatctttaatctcgacccctgatcatttattacacttcctggagaac
gaaactggagtttcaggtggtgaggaatttactcagtcctggtctctgcaggactccgtc
aaagaggaggatgacaggctaatgctggattctgacagtggagttgggactagtccccca
cactcccctgctgaatcttctgacagaagtatgtcagaagggtcaccacaaactagtggc
ttgtcatcagatgactcaagtcctattaggccaaaaccatatgatcgtcccagtacagaa
aatgtaggcagtttgtcaaaagtaaaagtcagcagtgtggagtcaagaggtctggagaaa
aagttgaagaagatggagcagaacaaaagtgcagcgacacggtacagacaaaagaagaga
gcagagcatggtgctatacttgcagaatgtagcttactggaagagaaaaataaaaacttg
caagagaaagctgactcattagtgaaagaaattcaatatttaaaagacttgatagaagaa
gttaggaaagccaaaagtagtagaagtgcaaaaggcttgtaa
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