Rhincodon typus (whale shark): 109919528
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Entry
109919528 CDS
T06055
Symbol
pou1f1
Name
(RefSeq) pituitary-specific positive transcription factor 1 isoform X2
KO
K09363
POU domain transcription factor, class 1
Organism
rtp
Rhincodon typus (whale shark)
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rtp03000
]
109919528 (pou1f1)
Transcription factors [BR:
rtp03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
109919528 (pou1f1)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Pou
Homeodomain
Homeobox_KN
ProRS-C_1
Motif
Other DBs
NCBI-GeneID:
109919528
NCBI-ProteinID:
XP_020375142
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Position
11:25037995..25087911
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AA seq
344 aa
AA seq
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MRGLSLMQIHTCAANHSQRNILLSANGKKVCSSKTSSLSLIMHHSNAAERFSLSNQGTRV
ASAAPSMLSSIQPLSTPKCSFMHLPPGSLTNTPTRLHYSMPSCHYGSQQSAYGVMADGLA
PCLYKLPDHTLSTSSCPLGHGFAPIHQSVLSEESIVIDLKQEFRKKNKTTEEPVSLDSPE
IKELELFANQFKVRRIKLGYTQTNVGEALAAVHGSEFSQTTICRFENLQLSFKNACKLKS
ILSKWIDEAEQAGALNNERTGTNERKRKRRTTISLLAKEALETHFGHQSKPSSQEIIQMA
DSLNLEKEVVRVWFCNRRQREKRVKTNLHHNSFQFPFKEHHDYR
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgggttatcactgatgcaaatacacacatgtgctgccaatcactctcaaaggaac
atcctgctttcagcaaatggaaagaaagtttgtagttctaagacctcttctctgtctttg
ataatgcaccattcaaacgctgccgaacgcttctcactctccaaccagggaaccagagtg
gcttcagcagctccctcaatgttatcttcaatccagccattgtctacgcccaaatgttct
tttatgcacctccccccaggctctttaaccaacacacctacacgtcttcactactccatg
ccatcttgccattatgggagccaacaatctgcatatggggtgatggcagatgggctggct
ccatgtctgtacaaactgcctgaccacacactgagcacgtcttcctgccctctgggacat
ggatttgccccgattcatcagtcagtcctaagcgaagaatccattgtcatcgacctcaaa
caggagtttcgaaaaaagaataaaacaactgaggagccagttagtttggattctccagaa
atcaaagagttggagctgtttgcgaatcaatttaaagtgagaagaataaagctaggttac
actcaaactaatgttggtgaggctcttgctgctgtgcatggttcagagttcagtcaaaca
actatttgccgctttgaaaatttacagctcagtttcaaaaatgcttgtaagctcaaatca
attctttccaagtggatagatgaagcagaacaagcaggagctttaaataatgaaagaact
ggaacaaatgaaagaaaaagaaagcgaagaactacaatcagcctgctggctaaagaagcc
ctggagacacactttggacatcaaagtaaaccttcctcacaggagatcatacagatggca
gatagtctaaatctggaaaaagaagttgtcagagtctggttctgtaaccgtcggcagaga
gagaaacgggtgaagacaaatctgcaccacaattcatttcagtttcctttcaaagaacat
catgattatagatag
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