KEGG   Rhincodon typus (whale shark): 109919539
Entry
109919539         CDS       T06055                                 
Name
(RefSeq) prolyl 3-hydroxylase 1-like
  KO
K08134  procollagen-proline 3-dioxygenase 1 [EC:1.14.11.7]
Organism
rtp  Rhincodon typus (whale shark)
Brite
KEGG Orthology (KO) [BR:rtp00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03110 Chaperones and folding catalysts [BR:rtp03110]
    109919539
  09183 Protein families: signaling and cellular processes
   00535 Proteoglycans [BR:rtp00535]
    109919539
Enzymes [BR:rtp01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.7  procollagen-proline 3-dioxygenase
     109919539
Chaperones and folding catalysts [BR:rtp03110]
 Other chaperones and cochaperones
  Others
   109919539
Proteoglycans [BR:rtp00535]
 Extracellular matrix (ECM) proteoglycans
  Basement membrane proteoglycans
   109919539
SSDB
Motif
Pfam: TPR_leprecan 2OG-FeII_Oxy_3 TPR_2 TPR_P4H TPR_7 YfiO Fis1_TPR_C TPR_16 ANAPC3 TPR_9 TPR_1 Consortin_N
Other DBs
NCBI-GeneID: 109919539
NCBI-ProteinID: XP_048476892
LinkDB
Position
49:951604..978137
AA seq 730 aa
MSLLPVLLLLVLLFGSGDHRTALPEPSLREPYNLLFSSGLQHYHQGDWEQAAGLLQRSLL
SRSALRRLLAHCRRLCRERGSEVGEGFFARVLGTATCLDSCLRFPSTRPRVSGQVRDAFR
SRAAYNYLQLSYYKLGELPKAAAAAQTFFEANPDHKEMRENIATYRKMEGVKPEHFQDLE
AQPHWVAYDEGLRLYEEERFEDAIPQLEEVPREFLSALEECQAECEGPYDPEEYSYLTYQ
SHLYEAISDHNLQVLTCAQECVGELSNKPGHSESRTNFLPSVFYLLQEAYHKVGNYQKAV
ECIQTFLLFQPTDRSALHNRAFYQSRLPANQGTDIPPREEIKSYIEESLLQKEMLYLAME
SLGHHFIDPDSWTPHELIPQSIQSNTRKENKSVHHPPKATERGPDRQRKSKMGQEDTLDK
LRASALSLANLKLVMDGVRLRGTDRLVFDGALARQECATLRNVAHTVAALEEESPRDSSA
GPRSANLEELSIQQALTLAHDSLLDPPAARLYYDASARVRRITQQLFDTLPLQPSISNLS
CRGPVTGDQAAGEDAVSRDPCHWEPEGLRCWRESLPALTGDYRAFLYLNDEFEGGEFYFA
DRGGKRVSEEISPKCGRLVVFLSGQENAHSVRPVTEGQRCALTFSFTEKTQHEQEVNPSV
DSLLELLYPASSTLGEPEQAPGPALHDRESPEQRERAHTQTRQARDGRQRQYKRPRPTAG
AESPALRDEL
NT seq 2193 nt   +upstreamnt  +downstreamnt
atgtccctccttcccgtgctgctgctgttggtgctgctgttcggcagcggggaccatcgc
accgcgctcccggagccctccctgagggagccctacaacctcctgttctccagcggcctc
cagcattaccaccagggggattgggaacaggcggccgggctgctgcagcgctcgctgctc
agtcgctcggccctgcgccgcctgctagcccactgccgccgcctgtgtcgggagcgggga
tccgaggtgggagaaggtttctttgcccgggtcctgggcacagccacctgcctggacagc
tgcctgcgcttcccgagcacccggccgcgggtcagcgggcaggtccgcgacgccttccgt
agccgagcagcctacaactatctgcagctctcctactacaagctcggggagttgccgaag
gctgctgcagctgctcagacattttttgaagcgaatccagatcacaaggagatgagggag
aacatcgcgacgtaccgcaagatggagggtgtaaaaccggagcatttccaagatctcgag
gcacagcctcactgggtggcctatgacgagggcctgagattatacgaggaggagaggttt
gaggatgccatccctcagctggaggaggtgcccagggagttcctctctgccctcgaggag
tgccaggctgagtgcgaggggccttatgatccagaggagtacagctacctcacgtatcag
agccacctctatgaggctatcagcgatcacaatctgcaggtgctgacctgtgcccaggag
tgcgtgggggagctgagcaataaaccaggtcatagcgagtcccgcacgaacttcctgccc
tccgttttctacctcctgcaggaggcctatcacaaggtcggcaattatcagaaggcagtg
gagtgtatccaaacgttcctgctgttccagcccacagaccgctcggcccttcataaccga
gccttctaccagtccaggctgccagccaatcagggcacagacatcccacctcgagaggag
attaaaagttacattgaggagtccctcttgcagaaggagatgttgtacctcgcgatggag
tctctggggcatcacttcatcgatccggattcctggacgcctcatgaactcatcccacag
tcaattcagagcaacaccaggaaagagaacaagagcgtccatcacccgcccaaggccaca
gagaggggcccggacagacaacggaaatccaagatggggcaggaagacaccctggacaag
ctaagagcctccgccctgtctctggccaacctgaagctggtgatggatggagtccgcctc
cgaggcacggaccggttggtctttgatggcgccctcgcccgccaggagtgtgccaccctg
cggaacgttgcccacactgtggcggcactggaagaggagagccccagagattcctcggct
ggtccccggagcgccaaccttgaggagcttagcatccagcaagctctgacgctcgcccac
gactccctccttgacccccctgccgcccgcttgtattacgatgccagcgcacgagtgcga
cgtatcacgcagcaactctttgacacacttcctcttcaaccgtccatctccaacttatcc
tgtcggggtccagtgacaggagatcaggcggccggtgaggatgcggtgtcgagggaccca
tgccactgggagccggaagggttacggtgttggagggagtcgctcccagcattgaccggt
gactacagggcctttctctatctcaatgatgaatttgaaggaggggaattttactttgca
gatcgtggaggcaagagagtttcagaggagatctccccaaagtgtggccgactggtcgtg
ttcctgtctggacaagagaatgcgcactctgtccgcccggtgacagaagggcagcgctgt
gccctcaccttcagtttcactgagaaaacccaacatgaacaggaggtgaatcccagtgtg
gacagtttactggagttgctgtacccggcatcctccacccttggtgagcctgaacaggca
ccgggccctgcactccatgaccgggagtcccctgagcagcgggagagagcccacacgcag
acgcgacaagcccgggacgggaggcagcggcagtacaagagaccccggcccacggcaggg
gcagagagtcctgctctcagggacgagctctga

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