Rhincodon typus (whale shark): 109919686
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Entry
109919686 CDS
T06055
Name
(RefSeq) tubulin beta-5 chain
KO
K07375
tubulin beta
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp04145
Phagosome
rtp04517
IgSF CAM signaling
rtp04540
Gap junction
rtp04814
Motor proteins
rtp05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
109919686
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
109919686
09144 Cellular community - eukaryotes
04540 Gap junction
109919686
09142 Cell motility
04814 Motor proteins
109919686
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
109919686
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rtp03036
]
109919686
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
rtp04812
]
109919686
04147 Exosome [BR:
rtp04147
]
109919686
Chromosome and associated proteins [BR:
rtp03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Other tubulins
109919686
Cytoskeleton proteins [BR:
rtp04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulins
109919686
Exosome [BR:
rtp04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
109919686
Exosomal proteins of colorectal cancer cells
109919686
Exosomal proteins of bladder cancer cells
109919686
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tubulin
Tubulin_C
Misat_Tub_SegII
Tubulin_3
Tubulin_2
Motif
Other DBs
NCBI-GeneID:
109919686
NCBI-ProteinID:
XP_020375306
LinkDB
All DBs
Position
4:109956431..109965896
Genome browser
AA seq
447 aa
AA seq
DB search
MREIVHVQAGQCGNQIGSKFWEVISDEHGIDPEGSYNGDSDLQLERINVYYNEATSQKYV
PRAILLDLEPGTMDSVRSGSLGHLFRPDNFIFGQTGAGNNWAKGHYTEGAELVDSVMDVL
RKECENCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVMPSPKVSDTVV
EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTSL
RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTARGSQQYRTLSVSELTQQMFDAKNMM
AACDPRHGRYLTVATVFRGAMSMKEIDEQMLAVQNKNSSYFVEWIPNNVKVAVCDIPPRG
LKMASTFIGNSTAIQELFKRISEQFSAMFRRKAFLHWFTGEGMDEMEFSEAESNMNDLVS
EYQQYQDATADEGEDFEVDEEELDEAQ
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgaaatcgtccacgtacaggccggacaatgtggcaaccagattggaagcaagttt
tgggaggtgataagtgacgaacatgggatcgatcctgaaggcagttataacggagactct
gacctgcagctggagaggattaatgtctattataacgaagcgacctcgcagaaatatgtt
ccgagggccatcttattggacttggagccggggacaatggacagtgtccgatcgggaagt
ttgggacatcttttcagacccgataacttcattttcggacaaactggtgcagggaataac
tgggccaaaggacactacacagaaggtgctgaactggttgactctgtgatggatgtgctg
agaaaagaatgtgagaattgcgactgcctccaggggtttcaactcactcactcactggga
ggtggtacaggttctggcatgggcacgctcctgatcagcaagatccgtgaagaatatccc
gatagaattatgaacaccttcagtgtcatgccgtctccaaaagtatcagacactgttgtt
gagccttacaatgctactttgtcagttcaccagttagttgagaacacagatgaaacttac
tgcattgataacgaggccctatatgatatctgtttccgtactctcaaactcaccactcca
acgtatggcgatttgaaccatctggtgtctgcgaccatgagtggagtgaccacatctctg
cgcttcccaggccagctgaatgcagatctgaggaaactggctgtgaacatggtgcccttc
cctcgattacacttctttatgcctggctttgcccctctgactgctcgaggcagtcaacag
taccgcactctttcagtctctgagctcactcaacagatgtttgatgccaaaaacatgatg
gctgcctgcgacccacgtcacggacgctatctgactgttgccactgtgttccgtggtgcc
atgtcaatgaaggaaatagatgagcagatgcttgcagttcagaacaagaacagcagctac
tttgtggaatggattcccaacaatgtcaaagtggctgtgtgtgacattcctccccggggc
ctgaaaatggcttccacctttattgggaacagtacagccattcaagagctcttcaaacgc
atctccgaacagttttcagccatgttccgcagaaaggctttcctgcactggttcactggt
gaaggaatggatgagatggagttttctgaagccgagagcaatatgaatgacctggtgtca
gagtaccagcaatatcaagatgcaacagctgatgaaggtgaggatttcgaagtggatgag
gaagaactggatgaggctcaatga
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integrated database retrieval system
