Rhincodon typus (whale shark): 109919725
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Entry
109919725 CDS
T06055
Symbol
vps52
Name
(RefSeq) vacuolar protein sorting-associated protein 52 homolog isoform X2
KO
K20298
vacuolar protein sorting-associated protein 52
Organism
rtp
Rhincodon typus (whale shark)
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rtp04131
]
109919725 (vps52)
Membrane trafficking [BR:
rtp04131
]
Protein recycling
Others
EARP complex
109919725 (vps52)
Endosome - Golgi transport
Tethering complex
GARP complex
109919725 (vps52)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps52_C
Vps52_CC
Sec3_CC
CoV_NSP7
DUF4795
COG6_N
Erp_C
Motif
Other DBs
NCBI-GeneID:
109919725
NCBI-ProteinID:
XP_020375341
LinkDB
All DBs
Position
35:complement(24356330..24387375)
Genome browser
AA seq
687 aa
AA seq
DB search
MPELNLGELDITSDEFILDEVDTHIQANLEDELVKEALKTGVDLRHYSKQVETELQHIEH
ASIKDYIKESRNIASLHNQITACDTILERMEQMLSMFQCDLSSISSEIQTLQEQSITMNI
KLKNRQSVRSELSQLVDELVIPNSMITTVLETSVTEQQFLEQLHELNNKINYVKEQSFKE
TLACSDVQDTLDRLKIKAVSKIREYILQKIYSFRKPMTNYQVPQNALLKYRFFYQFLLAN
ERHVAKEIRDEYVDTMSKIYFSYFKSYTNRLMKVQYEEVADKDDLMGVEDTAKKGFFSKP
SLKNRNTIFTLGNRGNVISSSELEAPIIVPHAAQKSDTRYPFESLFRSQHYALLDNSCRE
YLFLCDFFMVTGNSAQDLFNAIMGKTLTMFLKHVHTYIADCFDSIAIFLSIHIILRFKTI
MAKRNVPAVDKYWETLLEILWPRFEYILELNIQSIRNTDPQKLGALDTRPHYVTRRYAEF
SSAIVSINETHPNEKTHSLLGQLQVEVENFVLRMAAEFASRREQLIFLINNYDMMLGVLM
ERAADDSKEVESFQQLLTARTQEFIEEILSPPFGGMIAFVKEAEVLIEKGQLEKLKAEEG
WVVQLVRGFAGTWKQAVENLSQDVMRSFTNFRNGTGIIQGALTQLIQYYHRFHKVLSQPP
FRNLPVRSDLINIHHLMVEVKKHKPSF
NT seq
2064 nt
NT seq
+upstream
nt +downstream
nt
atgcctgagctgaatctgggtgaactggacataacatccgatgagtttatcctggacgaa
gtggacacacatatacaagccaatctggaagatgaactggtgaaggaggcgttaaaaacg
ggtgtggatctgaggcactactccaagcaggttgagacagaactacagcacatcgaacat
gcctccattaaggactacattaaggaaagtcggaacattgccagcctccacaatcagatc
acagcctgtgacaccatcctggagcggatggagcagatgctcagcatgttccagtgtgac
ctcagcagtatcagctccgagatccagaccctgcaagagcagtccatcaccatgaacatc
aagctgaagaatcgccagtcagtgcgcagtgagttgagccaactggtcgatgagctcgtc
atcccaaactcaatgatcactactgttctggagacatcagtaactgagcagcagtttctg
gagcagctccatgaactcaataacaagatcaattatgtgaaggagcagtcctttaaggaa
acgctggcttgttcagacgtgcaggacaccctcgaccggttgaagattaaggctgtttcg
aagatccgggaatatattctgcagaagatctactccttccggaagccaatgacaaactac
caggttccacagaatgcactcctcaaatacaggtttttctaccagtttctgctggcgaac
gagcggcacgtggccaaggagatccgagacgagtatgttgacaccatgagtaaaatctac
ttctcctacttcaagtcgtacaccaacaggctgatgaaagttcagtatgaagaggtggct
gacaaagatgacctgatgggtgtcgaggacactgcaaagaaaggctttttctccaaaccg
tcgttgaagaatcgcaacaccatttttacgctggggaaccgcggcaatgttatctcgtcg
tcggaactggaagcaccaatcattgtgcctcatgctgctcagaaaagtgacacccggtat
ccctttgagagtctgttccgtagtcagcactacgcacttctcgataacagctgccgcgag
tatctctttctctgtgacttcttcatggtgactgggaactctgcacaggatctcttcaac
gccatcatgggaaagaccctcaccatgttcttgaaacacgtgcacacctacatagcagat
tgcttcgacagcattgcgatctttctctccattcacatcattctccgcttcaagaccatc
atggccaagaggaacgtgccagctgtcgataagtactgggaaaccctgctggaaattctc
tggcccaggttcgaatacatcctggagttgaacattcagagcatccgcaacacagacccc
cagaagctgggagctctcgatactcggccacactatgtaacaagaagatacgccgagttt
tcttcagcaatcgtaagcattaatgaaacacatcccaatgagaagacccacagcctgctt
ggacagttacaggtggaggtcgagaactttgtcctgcgtatggcagccgagtttgcatcg
cgtcgagagcagctgatattcctcatcaacaactatgacatgatgctcggtgttttaatg
gagcgggcagcagacgacagtaaggaggtggagagtttccagcagctgctcacagccagg
acacaggagtttattgaagagatcctatcgcctccgtttggtgggatgattgcgtttgtg
aaggaagcagaggttctcattgaaaagggccagctggagaaactgaaagcagaggaaggc
tgggtggtgcagcttgtgcgaggatttgctggaacctggaagcaggcggttgagaatctc
agtcaagacgtcatgaggtctttcaccaacttcaggaatgggacggggatcatccaggga
gctctgacccagctgatccagtactaccaccgattccacaaggtgctctcccaacctcct
ttcaggaatctccctgtgcgttccgaccttatcaacatccaccacctcatggtcgaggtg
aagaaacacaagcccagcttctga
DBGET
integrated database retrieval system
