Rhincodon typus (whale shark): 109919737
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Entry
109919737 CDS
T06055
Symbol
cul4b
Name
(RefSeq) cullin-4B
KO
K10609
cullin 4
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp03420
Nucleotide excision repair
rtp04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
109919737 (cul4b)
09124 Replication and repair
03420 Nucleotide excision repair
109919737 (cul4b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rtp04121
]
109919737 (cul4b)
03400 DNA repair and recombination proteins [BR:
rtp03400
]
109919737 (cul4b)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rtp04147
]
109919737 (cul4b)
Ubiquitin system [BR:
rtp04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Cullin
109919737 (cul4b)
DNA repair and recombination proteins [BR:
rtp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
109919737 (cul4b)
TCR (transcription coupled repair) factors
Cul4-CSA complex
109919737 (cul4b)
Exosome [BR:
rtp04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
109919737 (cul4b)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cullin
Cullin_AB
Cullin_Nedd8
SecA_SW
Motif
Other DBs
NCBI-GeneID:
109919737
NCBI-ProteinID:
XP_020375360
LinkDB
All DBs
Position
14:32149609..32224411
Genome browser
AA seq
841 aa
AA seq
DB search
MFRTGLSSQNSPQEVRQQADVSPRKRKLAEAGEYEQHQQQTPQHTQLFPSAAPKSSSSSS
TSTCCNHQLQKRVKFEDSLDFVGLDVMMAEEQRKNSGCSVLTGHANGLTKSTTFANSKPG
TAKKLVIKNFKDKPKLPDNYTNETWQKLKEAVEAIQKSTSIKYNLEELYQAVENLCSYKV
SANLYKQLRQVCEDHIKAQIHQFREDSLDSVLFLKKIDKCWQDHCRQMIMIRSIFLFLDR
TYVLQNSMLPSIWDMGLELFRSHVISDRKVQNKTIDGILLLIERERNGEAIDRSLLRSLL
SMLSDLQIYQDSFEQRFLEETNRLYAAEGQRLMQEREVPEYLHHVNKRLEEEADRVITYL
DQSTQKPLIATVEKQLLGEHLPAILQKGLNSLLDENRIQDLSLLYQLFSRVRGGVQVLLQ
HWIEYIKTFGSTIVINPEKDKTMVQELLDFKDKVDHVVDVCFLKNEKFVNAMKEAFETFI
NKRPNKPAELIAKYVDSKLRAGNKEATDEELEKMLDKIMIIFRFIYGKDVFEAFYKKDLA
KRLLVGKSASVDAEKSMLSKLKHECGAAFTSKLEGMFRDMELSKDIMIQFKQYMQNQNIP
GNLELTVNILTMGYWPTYVPMEVHLPLEMVKLQEIFKTFYLGKHSGRKLQWQSTLGHCVL
KAEFKEGKKELQVSLFQTLVLLMFNEGEEFSLEEIKTATGIEDGELRRTLQSLACGKARV
LTKTPKSKDVEDYDKFTCNDDFKHKLFRIKINQIQMKETVEEQASTTERVFQDRQYQIDA
AIVRIMKMRKTLSHNLLVSEVYNQLKFPVKPADLKKRIESLIDRDYMERDKENTNQYNYV
A
NT seq
2526 nt
NT seq
+upstream
nt +downstream
nt
atgtttcgaacgggcctctcttcacaaaattcaccgcaggaggtgcgacaacaggctgat
gttagtccgaggaagcgaaagttagccgaggccggcgagtacgagcagcaccagcagcaa
acacctcagcatacccagctcttcccctccgcagcccccaagtcttcctcctcctcctcc
acctccacctgctgcaaccaccagcttcagaagagagtcaagttcgaggactcgctggac
tttgttggactcgatgtgatgatggcggaggagcagaggaaaaacagcggctgttccgtg
ctcacggggcatgccaatggcctgaccaaatccaccaccttcgccaacagcaagccgggg
acggctaaaaaattagttattaaaaatttcaaagataaacctaagttgcctgataattac
accaatgaaacctggcaaaaactgaaagaagccgtagaagcaattcagaagagcacctca
atcaaatacaatttggaggaactttatcaggctgtggagaacctctgttcttacaaagta
tcagcaaatttatacaaacagctgcgacaagtctgtgaggatcacatcaaagctcaaatt
caccagttcagagaggattccttagatagtgtcctgtttctaaagaaaatagataaatgt
tggcaggaccattgcaggcaaatgatcatgattaggagtatcttcttgtttctggataga
acttacgttctacaaaattcaatgcttccatctatttgggacatgggccttgaattattc
agatcccatgtaataagcgatcggaaggttcaaaataaaactattgatgggattcttctg
ttaattgagagagaaagaaatggtgaagctattgatcgtagtttgcttcgaagtctctta
agtatgctatcagatttgcagatatatcaagattcttttgaacaaaggtttttggaagag
acgaatcgtctatatgctgcagaaggtcaaagattgatgcaagaacgagaggttccagag
tatttgcaccacgttaataaacgtttagaggaggaggcagatcgggttatcacttacttg
gatcaaagcacacagaagcctctaatagctacggtggaaaagcaacttctaggtgaacat
ttaccagccattcttcagaaaggcttaaacagtcttctggatgaaaaccgaatacaagat
ctttcacttctttaccagcttttcagtagagttcgaggtggcgtgcaggttcttctacaa
cattggattgaatatataaagacatttggcagtacaatagtaattaatcctgaaaaagat
aaaacaatggttcaagaactattagatttcaaggacaaagtggatcacgtagtcgatgtc
tgcttcctgaagaatgaaaaatttgtcaatgcaatgaaggaagcctttgaaacgttcata
aacaaacgacctaataaaccagctgaactaatagccaaatatgtagactcgaagcttcga
gctggcaataaagaagctacagatgaagaacttgagaagatgctagacaaaattatgata
atatttagattcatttatggaaaagatgtatttgaggctttttacaagaaggacttggca
aagcgactgttggttggaaagagtgcatcagtagatgctgaaaaatcaatgctgtctaaa
ttaaaacatgaatgtggagctgcattcaccagcaagctggaaggaatgtttcgagacatg
gaactctcaaaagatattatgatccagtttaaacagtacatgcagaatcaaaatatacct
ggcaaccttgagctaactgtaaatatcctcacaatgggctactggccaacttatgtacct
atggaagttcatttacctctggagatggtaaaacttcaggagattttcaagacattttat
ctcggtaagcacagtggtagaaagttgcagtggcaatcaactttgggtcattgtgtattg
aaagcagaatttaaagagggtaagaaagagctgcaagtgtcgcttttccaaactctggta
ctgctcatgtttaatgaaggggaagagttcagtttggaagaaattaaaactgctactgga
atagaggatggagagttgcgaaggacattgcagtctttggcatgtggcaaagcacgtgta
ctgaccaagactccaaaaagcaaagatgtagaagactatgacaaatttacctgtaatgat
gatttcaaacataagctgttcaggatcaagattaatcagatccagatgaaagaaacggtt
gaagaacaggccagcactactgaaagagtgttccaggacagacagtatcaaatagatgct
gctattgtccgaatcatgaaaatgagaaagactttgagccacaatcttcttgtatctgaa
gtatataatcagctgaaatttccagtcaagcctgctgatctaaagaaaagaatagagtca
ttaattgacagggactacatggaaagagacaaagaaaataccaaccaatacaactatgtg
gcatag
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