Rhincodon typus (whale shark): 109919800
Help
Entry
109919800 CDS
T06055
Name
(RefSeq) retinoic acid receptor RXR-alpha-A isoform X1
KO
K08524
retinoid X receptor alpha
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp03320
PPAR signaling pathway
rtp04148
Efferocytosis
rtp04920
Adipocytokine signaling pathway
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
109919800
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
109919800
03320 PPAR signaling pathway
109919800
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rtp03000
]
109919800
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
rtp03310
]
109919800
Transcription factors [BR:
rtp03000
]
Eukaryotic type
Zinc finger
Cys4 hepatocyte nuclear factor 4-like
109919800
Nuclear receptors [BR:
rtp03310
]
2. Hepatocyte nuclear factor 4 like
2B. Retinoid X receptor (RXR)
109919800
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hormone_recep
Nuc_recep-AF1
zf-C4
tRNA_bind_3
Motif
Other DBs
NCBI-GeneID:
109919800
NCBI-ProteinID:
XP_048469473
LinkDB
All DBs
Position
28:complement(41565712..41636902)
Genome browser
AA seq
456 aa
AA seq
DB search
MNCDSDGAAMNAPSLHPQMMGSGVSPTINSPGQLHSPISTLNSPVNGLSSPFSVISSPLG
PHTISIPSSHGMGYGGQSPQINSSMNSVSSTEDVKPPLGINGVLKISPHSSNCPLSLTKH
ICAICGDRSSGKHYGVYSCEGCKGFFKRTVRKDLTYTCRDNKDCIIDKRQRNRCQYCRYQ
KCLAMGMKREGMDADFRAVQEERQRGKDRNENEVESTSSANEDMPVEKIVEAELAVEPKT
ETYIDSSLGMASSSPNDPVTNICQAADKQLFTLVEWAKRIPHFSELPLDDQVILLRAGWN
ELLIASFSHRSITVRDGILLATGLHVHRNSAHSAGVGAIFDRVLTELVSKMRDMQMDKTE
LGCLRAIVLFNPDAKGLSNPGEVEALREKVYASLEGYCKQKYPEQPGRFAKLLLRLPALR
SIGLKCLEHLFFFKLIGDTPIDTFLMEMLEAPHQIT
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atgaattgtgattccgacggagcagcgatgaatgcaccttctcttcacccccagatgatg
ggctctggggtcagccccaccatcaactcccctggacagctacattcaccaataagcact
ttgaactctccagtgaatggactgagctctcccttctcagttatcagctcacctctggga
ccccacacaatatccatcccttcatctcatggcatgggctatggggggcagagtccgcag
atcaactcgtccatgaattcggtcagcagtacggaggatgtgaaaccacctttgggaatt
aatggtgtgcttaaaatatcacctcattcctcaaactgtccactttctctcaccaagcac
atctgcgccatctgtggggacaggtcttcaggcaaacattatggtgtttacagctgtgaa
ggttgtaaagggttcttcaaacgcacggtgcgcaaagaccttacctacacttgccgtgac
aacaaggactgtatcatcgacaagcgccagcgtaaccggtgccagtactgccgctatcag
aaatgtctagccatggggatgaagcgggaaggtatggacgcagacttcagagcggtccag
gaggagagacagcgaggtaaggacaggaatgagaacgaggtggagtcaacaagcagtgcc
aatgaggacatgccagtggagaagatagtggaggctgagctggctgtcgagcccaagact
gagacttacatcgactccagcctcggcatggccagcagctcgccaaacgacccagtcacc
aacatctgccaagcagctgacaagcaactgttcacacttgtcgagtgggccaagaggatc
ccacatttctccgagctccctctggacgaccaggttatcctcttgcgggcaggttggaat
gaactgctgattgcttcattctctcaccgttccatcactgtgagagatggcattctactg
gcaaccggtctccacgtgcacaggaacagtgcgcacagcgctggggtgggagctatcttc
gacagagttctgacagaacttgtgtctaaaatgcgtgatatgcaaatggacaagacagag
ctgggctgtttgcgagcaattgtcctcttcaatccagatgcaaaaggcctgtccaatcct
ggggaggtggaggctctccgtgaaaaagtgtatgcttcgctagaaggatactgcaaacag
aaatacccagagcaacccggcaggtttgctaagctcctcctccgattgccagcccttcgc
tctattggactgaagtgtctggaacacctgttcttcttcaagctgattggagacaccccg
attgacactttcctcatggagatgctggaagcgcctcatcaaatcacctaa
DBGET
integrated database retrieval system
