Rhincodon typus (whale shark): 109919895
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Entry
109919895 CDS
T06055
Symbol
hdac3
Name
(RefSeq) histone deacetylase 3 isoform X1
KO
K11404
histone deacetylase 3 [EC:
3.5.1.98
]
Organism
rtp
Rhincodon typus (whale shark)
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rtp03036
]
109919895 (hdac3)
Enzymes [BR:
rtp01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
109919895 (hdac3)
Chromosome and associated proteins [BR:
rtp03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class I HDACs
109919895 (hdac3)
HDAC complexes
SMART complex
109919895 (hdac3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
Motif
Other DBs
NCBI-GeneID:
109919895
NCBI-ProteinID:
XP_048459551
LinkDB
All DBs
Position
12:62439199..62482977
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AA seq
428 aa
AA seq
DB search
MSRKVSYFYDPDVGNFHYGAGHPMKPHRLSLTHSLVLHYGLYKKMMVFKPYQASQHDMCR
FHSEDYIDFLQRVSPNNMQGFTKSLNTFNVGDDCPVFPGLFEFCSRYTGASLQGATQLNN
KVCDIAINWAGGLHHAKKFEASGFCYVNDIVIGILELLKYHPRVLYIDIDIHHGDGVQEA
FYLTDRVMTVSFHKYGNYFFPGTGDMYEVGAESGRYYCLNVPLRDGIDDQSYRLLFQPVI
KQVVDFYQPTCIVLQCGADSLGCDRLGCFNLSIKGHGDCVEFVKSFNIPLLVMGGGGYTV
RNVARCWTFETSLLVDEEISDELPYNEYFEYFAPDFTLHPDVSTRIENQNTRQYLDQIRQ
TIFENLKMLNHAPSVQIHDVPSDLLSYERTDEPDPEERGSEDNYNRPEAANEFYDGDHDN
DKESDVEI
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atgtccaggaaggtctcttacttttatgacccagatgtgggcaacttccattacggtgct
gggcatcccatgaagccacatcgtctgtctctcactcacagtttggttctacattatgga
ctatacaagaaaatgatggtattcaaaccctatcaggcctctcaacatgacatgtgccgg
tttcactctgaggactacatagatttcctgcagagagtgagtcccaacaacatgcagggt
ttcaccaagagcctgaacaccttcaatgtgggagacgattgtcctgtgtttccgggatta
ttcgagttctgctcaagatacacaggagcttctctacaaggagcaacacaattaaacaac
aaggtgtgtgatattgccattaattgggctggaggacttcatcatgcaaagaaatttgag
gcttcgggattctgttatgtgaacgatattgtcattggaatcctggaattgctaaagtac
catccacgtgtcctgtacattgatattgatattcaccatggtgatggggtgcaggaagcc
ttctatctcactgatcgagttatgactgtatctttccacaagtatgggaactactttttc
cctggaacaggtgacatgtacgaggttggtgcagaaagtggacggtattattgcctgaat
gttccactccgggatggaatcgatgaccaaagttacagactcttgtttcaaccagttatc
aaacaggtcgtggatttctaccagcccacatgtatcgtgctgcaatgtggtgcagattct
ctcggctgtgatcgtctcggttgcttcaatctcagtataaaaggacatggggattgtgtt
gagtttgtgaaaagcttcaacattcctctactggtgatgggaggcgggggatacactgtt
cgaaatgttgctagatgctggacttttgaaacctctttgcttgttgatgaagagataagc
gatgagctgccttataacgaatactttgaatactttgctcccgacttcacgcttcaccca
gacgtgagcaccaggattgaaaaccagaacaccaggcagtacctggatcagatcaggcag
accatctttgagaacctgaaaatgttgaatcatgctcccagtgtccagattcacgatgtg
ccttcagacttactgagctacgaacggacagacgagcctgacccagaggagcgtgggtca
gaggacaactataataggccagaagctgcaaatgaattttatgatggtgaccacgataat
gacaaggagagcgatgtggaaatatga
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