Rhincodon typus (whale shark): 109919904
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Entry
109919904 CDS
T06055
Name
(RefSeq) limbic system-associated membrane protein
KO
K06772
limbic system-associated membrane protein
Organism
rtp
Rhincodon typus (whale shark)
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
rtp04515
]
109919904
Cell adhesion molecules [BR:
rtp04515
]
Immunoglobulin superfamily
IgLON family
109919904
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
Ig_2
ig
V-set
Ig_5
Izumo-Ig
V-set_CD47
C2-set_2
Ig_PDGFR_d4
Sp38
Motif
Other DBs
NCBI-GeneID:
109919904
NCBI-ProteinID:
XP_048458888
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Position
11:complement(46582726..47307278)
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AA seq
364 aa
AA seq
DB search
MVSRGPFYQRPLPVILLRFLCLLPTGLPVRSVDFSRGTDNITIRQGDTAILRCYVDDRIS
KVAWLNRSNIIFAGNDKWSLDPRVTLLTSARLEYSLQIQQVDVSDEGPYTCSVQTQHHPK
TYQVHLIVQVPPKIYNISSNITVNEGSNVTLVCLANGRPEPVINWRHISPSAREFEEEEE
YLEIFMISKYQAGIYQCKAANEVSNADEKKVHITVNYAPTIKYAQSADVAVGRTGMLHCE
VSAVPPAVFEWYKEDKRIYNSSQGIQIQNLDSRSSLIVTNATEDHYGNYTCVAGNKLGIA
NASIFLYKSILPTIPNPIQEQIETTVHSEKRGPGSMRDSGTGLAGITISLWLLAATLVCL
IYKC
NT seq
1095 nt
NT seq
+upstream
nt +downstream
nt
atggtatctcggggtcctttttatcagcgcccactacccgtaatccttctgagatttctc
tgccttcttccaacaggactgccggttagaagcgtggacttctccagggggacggacaac
atcaccatcaggcagggagacacggctatcctcaggtgctatgttgatgacagaatctca
aaggttgcttggctgaaccgatctaatatcatttttgctggaaatgacaaatggtccctg
gaccctcgagtcactctgttgaccagcgctcgcttagagtatagccttcagattcaacag
gtggatgtgtctgatgaaggtccttacacatgttcagtgcagacccagcaccatcctaag
acctatcaagtgcatttgatcgtgcaagttccaccaaaaatctacaacatctcatccaac
atcacagtgaatgaaggcagcaatgtgactcttgtgtgcttggctaatggaagaccagag
cctgtcataaattggagacacatttctccttcagccagggaatttgaagaggaagaggaa
tacctagaaatcttcatgatcagcaagtaccaagcaggcatttaccagtgcaaagccgct
aatgaggtttccaatgccgatgagaagaaagtccatatcactgttaactatgctcccact
attaagtatgctcagagtgcagacgttgcagtgggccgtactgggatgctgcactgtgag
gtttcagctgtgccaccagcagtttttgagtggtacaaggaagacaagcggatatataac
agctcgcaagggatccagatccagaacttggacagtcgctccagtctcattgtcactaat
gccacagaggatcactatggcaactacacatgtgtggcaggcaacaagctggggatcgcc
aatgcaagcatatttctatacaaaagtattctgccaactattccaaaccccattcaagag
caaatagaaaccactgtgcactcagaaaaaagagggccaggttccatgcgagactcaggc
accggattagcaggcatcaccatatcactgtggctgctagcagcaactctagtctgtcta
atttacaagtgttaa
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