Rhincodon typus (whale shark): 109919937
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Entry
109919937 CDS
T06055
Symbol
pcna
Name
(RefSeq) proliferating cell nuclear antigen
KO
K04802
proliferating cell nuclear antigen
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp03030
DNA replication
rtp03410
Base excision repair
rtp03420
Nucleotide excision repair
rtp03430
Mismatch repair
rtp04110
Cell cycle
rtp04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
109919937 (pcna)
03410 Base excision repair
109919937 (pcna)
03420 Nucleotide excision repair
109919937 (pcna)
03430 Mismatch repair
109919937 (pcna)
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
109919937 (pcna)
09144 Cellular community - eukaryotes
04530 Tight junction
109919937 (pcna)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rtp03032
]
109919937 (pcna)
03400 DNA repair and recombination proteins [BR:
rtp03400
]
109919937 (pcna)
DNA replication proteins [BR:
rtp03032
]
Eukaryotic type
DNA Replication Elongation Factors
Other elongation factors
109919937 (pcna)
DNA repair and recombination proteins [BR:
rtp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
109919937 (pcna)
MMR (mismatch excision repair)
Other MMR factors
109919937 (pcna)
TLS (translesion DNA synthesis) factors
Other TLS factors
109919937 (pcna)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PCNA_C
PCNA_N
Rad1
Rad9
Hus1
Motif
Other DBs
NCBI-GeneID:
109919937
NCBI-ProteinID:
XP_020375558
LinkDB
All DBs
Position
40:complement(11655458..11663860)
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AA seq
261 aa
AA seq
DB search
MFEARLVQGSILKKVLEALKDLITEACWDISSTGISLQSMDSSHVSLVQLTLRSDGFDTY
RCDRNLAMGVNLSSMSKILKCAGNDDIITLRAEDNADTLALVFESQNQEKVSDYEMKLMD
LDVEQLGIPEQEYSCVVKMPSGEFARICRDLSQIGDAVVISCAKDGVKFSASGELGTGNV
KLSQTSNVDKEDDAVTIEMNEPVQLTFALQYLNFFTKATPLSPTVTLSMSADIPLVVEYK
IADMGHIKYYLAPKIEDEDTS
NT seq
786 nt
NT seq
+upstream
nt +downstream
nt
atgtttgaggctcgcctggtgcagggcagcatcctgaagaaggtgctggaagccctcaag
gacctcatcaccgaggcttgttgggacatcagctcgaccgggatcagcctgcagtccatg
gacagctcgcatgtgtccctggtgcagcttaccctgcgcagcgatggcttcgacacctac
cgctgtgaccgcaacctggccatgggcgtcaacctgagcagcatgtccaagattctcaaa
tgtgcaggcaatgacgatatcatcaccctgagagctgaggacaatgctgacacactggct
ctggtgttcgagtcacagaaccaggagaaagtctccgattatgagatgaagctgatggat
ttggacgttgaacagctgggaatcccggagcaggagtatagctgcgtggtgaagatgcca
tctggagaatttgccagaatctgccgggatttgagccagatcggtgacgcggtggtgatc
tcgtgcgccaaagacggggtgaagttctcagccagtggggagctgggcactgggaacgtc
aagctctcgcagaccagcaatgtggacaaggaggacgatgcagtgaccattgagatgaat
gaacccgtgcagttgactttcgctctgcagtacctgaatttcttcaccaaggccaccccg
ctgtcaccgaccgtgacactcagcatgtccgcggatattcctctcgtggtggagtataag
attgctgatatgggtcacatcaagtattacctggcccccaagattgaagacgaggacacc
tcttaa
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integrated database retrieval system
