Rhincodon typus (whale shark): 109919941
Help
Entry
109919941 CDS
T06055
Symbol
sox10
Name
(RefSeq) transcription factor SOX-10
KO
K09270
transcription factor SOX7/8/10/18 (SOX group E/F)
Organism
rtp
Rhincodon typus (whale shark)
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rtp03000
]
109919941 (sox10)
Transcription factors [BR:
rtp03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
109919941 (sox10)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
Sox_N
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
109919941
NCBI-ProteinID:
XP_020375562
LinkDB
All DBs
Position
37:19069394..19092207
Genome browser
AA seq
440 aa
AA seq
DB search
MSDDRSVSDVASSGGSESESVVSPGSSLAPDGDEKFQAGTEEGSGKRESEEDKFPLCIRE
AVSQVLEGYDWTLVPMPVRVNGSSKNKPHVKRPMNAFMVWAQAARRKLADQYPHLHNAEL
SKTLGKLWRLLNENDKRPFVEEAERLRSQHKKDHPDYKYQPRRRKNMKPGQAESEGHTDD
GHLSAGQPHYKAVPQDRGRGAGASPLSEGHGEHTGQNHGPPTPPTTPKTEIQPGKAEGKR
DGRPLVEGGKPHIDFGNMDIGELSHDVISNMETFDVHEFDQYLPPNGHPGHGQSLAGGAY
VGNYGLGGSSWIAKQHGGAGTPCSSASESKAQIKTEQVHPSHYTELQHSSAQITYTSLSL
PHYGSAFPTITRSQFDYPEHQPSGSYYNPSSQASGLYTAFSYMGPSQRPLYPSISDPSSV
PQSRSPTHWEQPIYTTLTRP
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atgtcggatgatcggagcgtgtcagacgtggcgagctcgggaggctcagagagtgagtcg
gtggtttctcctggatcctctctcgctcctgatggagatgaaaagttccaggctggcacc
gaggaaggcagtggcaaacgggagagcgaggaggacaaatttccgctgtgcatccgagaa
gcggtgagccaagtgctggaaggttatgactggaccctagtgcccatgccggtccgagtc
aacggctcctctaagaataagcctcatgtcaagagacctatgaacgccttcatggtgtgg
gctcaggccgcaagaagaaaactggcagatcaatacccacatctccacaatgcagagctt
agcaagactctgggcaaactctggaggttactgaatgagaacgacaagcggccgtttgtg
gaggaggcggagaggctacggtcgcagcataagaaggaccatcctgactacaaataccag
ccgcgtcggcgcaagaacatgaagccaggccaggcagagtctgagggtcacactgacgat
ggccacctctccgctgggcagcctcactacaaggctgtgcctcaggaccgtgggcgtggt
gcgggagcttccccgctctcggaggggcacggagagcacacaggccagaaccacgggccc
ccgacacctcccaccaccccgaagacggagatccagccggggaaagcggagggcaagcga
gatgggcgcccgctggtggaagggggtaaaccgcacatcgactttggcaatatggacatc
ggggagctgagtcacgatgtcatctccaacatggaaacctttgacgtccatgagtttgac
cagtacctgccccccaatgggcacccaggtcatggccaaagcctggcaggaggggcgtat
gttgggaattacgggctagggggcagttcctggattgccaagcagcacggtggagctggt
accccctgttcctcggcatccgagtccaaagctcaaatcaagacggagcaagttcacccg
agtcactacacagagctacagcactcctcggcccagataacatacacctcactgagcctc
ccacactatggctctgctttccccaccatcaccaggtcccagtttgactaccctgagcac
caaccttccggatcctactacaacccctctagccaggcatccggactctacaccgccttc
tcctacatgggcccatctcagcggccactctacccgtctatcagcgacccgtcctcggtg
cctcagtctcgcagccccactcactgggagcagccgatctacacaacgctcactcgacca
tag
DBGET
integrated database retrieval system
