Rhincodon typus (whale shark): 109919954
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Entry
109919954 CDS
T06055
Symbol
ascc3
Name
(RefSeq) activating signal cointegrator 1 complex subunit 3
KO
K18663
activating signal cointegrator complex subunit 3 [EC:
5.6.2.4
]
Organism
rtp
Rhincodon typus (whale shark)
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rtp03400
]
109919954 (ascc3)
Enzymes [BR:
rtp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
109919954 (ascc3)
DNA repair and recombination proteins [BR:
rtp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
109919954 (ascc3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec63
DEAD
SNRNP200_wHTH
ResIII
Helicase_C
Helicase_PWI
AAA_22
AAA_19
T2SSE
IstB_IS21
Motif
Other DBs
NCBI-GeneID:
109919954
NCBI-ProteinID:
XP_048452880
LinkDB
All DBs
Position
5:28776572..29270593
Genome browser
AA seq
2202 aa
AA seq
DB search
MELPRLTGALRSFSNVTRQDEYIVDSSDLKTKRSKMKEYYCKTELTWKDLTHFVENVAQN
EHQVISENLKTLLKAARQLVGIEHEQETVESAAVFLFKTFHDKDHVGHEETKAVKQIFGP
FPPSAATTACNAVYRIASNFSEEELQKLLRTNESARQNSHVHFGKNINFSFDSFVLEPSE
ELPLNWQTKNQKDFSLDYHKYLNNHQGDFKNGSSDSSDLKSSNKVDGSFLRQEVDSYIIR
TLQDSSDRPMTDDLCGTLFEMLASTKSDDELQNELFELLGPEGFELIEKVLQHRSVIVEK
ALTHNTDHKLRNLQGLGGNTQPIYGCQVTVRSEQERQLLKQYRREEKRQAKREKKDEGEI
SGDGLQNFDPKALRLQREHALQNARIAPILTRQPDYERIQYPHVYDSKIEAKQSPAFIAG
AKIFLSEDVERENNKVYEQVVIPATQPMPIGIQEKPVDIKNLDEIGQLAFKGMKQLNRIQ
SVVFETAYKTNENMLICAPTGAGKTNIAMLTVLHEIRQHIHQGMIRKDEFKIVYVAPMKA
LAAEMTNYFSKRLEPLGILVKELTGDMQLTKGEILRTQMLVTTPEKWDVVTRKSVGDVAL
SQIVRLLILDEVHLLHEDRGPVLESLVARTLRQVESTQSMIRILGLSATLPNYIDVATFL
HVNPYIGLFFFDGRFRPVPLKQTFIGIKASNKMQQLHDMEEVCYEKVLMQLKEGYQVMVF
VHARNSTVRTAMLLQEMAKNQGDIMYFVPNQSADYGSAEKQIQKSRNKQLRELFPDGFGI
HHAGMLRQDRTLVENCFSHGHIKVLVCTATLAWGVNLPAHAVIIKGTQIYDAKRGSFVDL
GILDVMQIFGRAGRPQFDRFGEGTIITAHDKLSHYLTLLTQQNPIESQFLARLADNLNAE
IALGTVTNVEEAVKWLSYTYLYVRARTNPLAYGINHKTYQKDPALEKYRRDLVIDAGRNL
DKAKMVRFEERTGYFSITDLGRTASHYYIQYSTIETFNELFNAHKTEADIFALVSKAEEF
EQIKVREEEVEELLQLLDDYCQLPVAGGAENTYGKVNILLQTYIGHGELDSFSLISDTAY
VAQNAARIVRALFEIALRRRWPAMTYRLLNLCKIIDRRLWGWCNPLRQFSVLPGHVLAKL
EEKKLTIDKMKDMRKDEIGHMLHHVNIGLKVKQCVHEIPSIALEASIQPITRTVLRVRLT
ITPDFKWHDQTHGSVGEPWWIWVEDPVNDHIYHSEYFLLQKKQVLSKEPQLLVFTIPIFE
PLPSQYYIRAVSDRWLGAEAVCIINFQHLILPERHPPHTELLDLQPLPINALGNREYEAL
YKFTHFNPIQTQIFHTLYHSDCNVLLGAPTGSGKTVAAELAIFRVFNKYPTSKAVYIAPL
KALVRERIEDWKVRITEKLGKNVIELTGDVTPDMKAIAKADLIVTTPEKWDGISRSWQNR
SYVQKVSIIIIDEIHLLGDDRGPVLEVIVSRTSFISSHTDSPVRIVGLSTALANAKDLAD
WLGIRQNGLFNFRPSVRPVPLEVHIHGFPGQHYCPRMASMNKPTFQAIRSHSPSKPVLIF
VSSRRQTRLTALDLIAFLAAEDDPKQWLHMDEREMSDIIEMVRDSNLKLTLAFGIGLHHA
GLHERDRKHVEELFVNCKIQILIATSTLAWGVNFPAHLVIVKGTEFYDGKTRRYVDFAIT
DVLQMMGRAGRPQFDDQGKAVILVHDLKKDFYKKFLYEPFPVESSLLEVLSDHMNAEISA
GTISSKQDAMDYITWTYFFRRLIMNPSYYNLDDINHDTMNKYLSNLVEKSLADLEYSYCI
SVGEDNRSLQSLDLGRIASYYYLKHQTMKMFKSQMKADCCVEDLLSVLTDAAEYADLPVR
HNEDQLNSDLAKHLPVEVNPHSFDSAHTKAHLLLQAHFCRAALPCPDYATDTKSVLDQAI
RICQAMLDVAANNGWLATALNIINLIQMVIQGRWVHDSSLLTLPNIEQQHLYLFRKWNVG
RRKSSPKSYKGPIECLPELIAACEWREDIFHSIVADELQAAQISQAWNFLSNLPIIEVNL
LIKGWWENAPNGENEKALPNVGTGIRDEKNWTQVHADQEYVLQINLRRISLVRSKGKYDS
KAITPRFPKAKDEGWFVILGEVDKKELMALKRVGYIRNHSIISLAFYTPETTGRYIYTLY
LMNDSYLGMDQQYDFYLDVIPASIVAQTNTEVSDAMNDLTVA
NT seq
6609 nt
NT seq
+upstream
nt +downstream
nt
atggaactacctcgtctaacaggagctttgcgctccttctcaaatgtcacaagacaagat
gaatatattgtggattcttcagacttgaagaccaagagatcaaagatgaaagaatactat
tgcaagacagagttgacctggaaagatttaacccattttgttgagaatgtggcacagaat
gaacatcaagttattagtgaaaatctgaagactctcttgaaggcggccagacagcttgtt
ggcatcgaacatgaacaagagactgttgaaagtgcggctgtttttctcttcaaaacgttt
catgataaggaccacgttggacatgaagaaacaaaagctgttaaacaaatatttgggcca
tttcctccttcggctgccactactgcctgtaatgcagtatatagaattgcttcaaatttt
agtgaggaagaattacagaaattacttcgtacaaatgaatctgcaagacaaaattctcat
gtacactttggtaaaaatattaatttttcatttgattcatttgttttggagccttcagaa
gagttgcccttgaactggcagacaaaaaaccaaaaggatttcagtctggattaccataag
tatttaaacaatcatcaaggagattttaaaaacggatcaagtgatagttcagacctaaaa
tcttcaaacaaagtggatggttcatttttaaggcaagaggttgatagctatattattaga
accttacaagactcatcagatagaccaatgactgacgacttgtgcggaacattgtttgag
atgctggcatcaactaaaagtgatgatgaacttcaaaatgagctgtttgaacttcttgga
cctgaaggatttgagctaattgagaaggttctgcagcacaggagtgtgatagtagaaaaa
gctctgacccacaatacagatcacaagctccgaaatcttcaaggcttgggaggaaataca
caacccatctatggctgtcaagtcactgttcgttctgaacaagaaaggcaactgttaaaa
cagtatcgtagagaagaaaaacgtcaagccaagcgagagaaaaaagatgagggggaaatt
tcaggcgatggtctgcaaaactttgatccaaaagctttacgtttacaaagggagcatgct
cttcagaatgcacggatagcaccaattctgacaagacagcctgattatgaacgcatccaa
tatccacatgtttatgattcaaaaattgaagcaaagcaatccccagcttttattgctggt
gcaaagatatttctttcagaagatgttgagcgagagaacaacaaagtctatgaacaagta
gtcattcctgcaacacaacctatgccaattggtattcaagagaaaccagttgatatcaaa
aacttggatgagatcggacagctggcttttaaagggatgaagcaactgaaccgcatccag
tcagtggtatttgagacagcttacaaaacaaatgagaatatgctgatctgtgcacctact
ggagcaggaaaaaccaacattgccatgcttactgttttgcatgaaatccgccagcatatc
caccaaggaatgatcagaaaggatgagttcaagattgtatacgtagcgcctatgaaggcc
ttagctgctgagatgacaaattactttagcaagcgtctagagccattgggtattctggtg
aaggagcttactggcgacatgcagttaaccaaaggagaaattttaaggacacagatgctt
gtgacaacgcctgagaagtgggatgttgtaacacgtaaaagtgttggtgatgttgccctg
tctcagattgttaggttgttaattttggatgaggttcacctattgcatgaagatagagga
ccagttcttgaaagcttagtggcacgaacactacgacaggtggaatccacacaaagtatg
atcagaattctaggtttatcagccaccctgcccaactacatcgatgtagccacatttctt
catgttaatccctatattgggctttttttctttgatggaagatttcgacctgtgcctcta
aaacagactttcataggaattaaagcatcaaacaagatgcagcaactgcatgacatggag
gaagtatgttatgagaaggttttgatgcaactgaaggaaggataccaggtgatggtgttt
gtgcatgcaagaaattcaactgtccgaacagccatgcttcttcaagagatggcaaaaaac
cagggtgatatcatgtactttgtaccaaaccaaagcgcagactatggctcagctgagaaa
cagattcagaaatcccggaacaaacagctacgtgaactgttcccagatggatttggcatc
catcacgctggaatgttacgtcaagaccggactttggttgaaaactgcttttcacatgga
cacataaaagtgttggtgtgcacagctacattggcctggggtgtcaatcttcctgcgcat
gctgtcatcatcaagggtactcaaatatatgatgcaaagagggggtcctttgttgactta
ggaattttagatgtgatgcagatttttggcagagctggacgaccgcagtttgacagattt
ggtgaaggcacaatcatcactgctcatgataaactgagtcattacttaactttgctgact
cagcagaatccaattgaaagtcagttccttgctcgtttggcagacaatctaaatgcagag
atagctttgggaacggtaacaaatgttgaagaagcagtgaaatggctgagctacacctac
ctttatgtgcgggcacgaaccaacccattagcctatgggatcaatcacaaaacttaccag
aaggaccctgcgctggaaaaatacaggcgagatctagtcatagacgctgggcgaaatcta
gacaaagccaagatggttcgttttgaagagagaactggttatttttctataacagatctt
ggtagaactgccagccattactatattcaatatagtactattgagacatttaatgaattg
ttcaacgctcacaagactgaagcagacatttttgctcttgtatctaaagctgaagaattt
gagcagatcaaggtaagggaggaagaagtggaggagctccttcagctgctggatgattac
tgtcagttacctgtcgcaggtggagcagagaatacctatgggaaagtgaatattcttctc
caaacctacattggccatggagagttggatagcttttcactcatttctgacactgcttat
gttgcacagaatgcagcccgtattgtacgagcacttttcgaaattgccctgagaaggcgc
tggcctgcaatgacataccgattattgaatttgtgcaagataattgacaggagattgtgg
ggatggtgcaatccactgcgccaattctcggttttgccaggtcatgtgcttgcaaaattg
gaggaaaagaaactcaccatagataagatgaaggacatgcgcaaggatgaaataggccac
atgctacatcatgtgaacattgggttaaaggtgaagcaatgcgttcatgaaattccttct
atagctctggaagcaagcatccagcctatcacgcgcactgtccttcgggtccgactaacc
attactcctgacttcaaatggcatgatcagactcatggatctgttggtgaaccttggtgg
atttgggtggaagatcctgtgaatgaccacatatatcactccgaatacttcctcctccaa
aagaagcaggttttgtccaaagagccgcagctgctggtatttaccattcctatttttgag
ccattgccctctcaatactacatccgggctgtgtctgatcggtggctgggagctgaagca
gtgtgcataataaactttcagcatttgattttgccagagagacatccacctcacaccgaa
ttgcttgatctgcagccattgcccatcaatgctctgggaaatcgagagtatgaagcattg
tacaagttcacccacttcaatccaatccagactcagatatttcacaccctctatcattct
gactgcaatgtactacttggagctcccactgggtctggaaagacagtcgcggctgaactg
gcgatatttcgtgttttcaacaaatacccaacatctaaggctgtttatattgctcctctg
aaggcacttgtccgtgagcgaattgaagattggaaagtcaggattacagagaagctgggt
aaaaacgtcatagaactgacaggagatgtgactccagacatgaaagcaattgcaaaagct
gacctcattgtcacaacccctgagaaatgggatggcatcagtagaagttggcaaaataga
agctatgtccagaaagtgtcgatcatcattatagatgagatccacttattaggggatgac
agaggtcctgtgctggaagtaattgtgtccagaactagtttcatctcctctcacacagat
agccctgtgaggatagtggggctatcgaccgcactggcaaatgccaaagacctggctgac
tggttaggtatccgacagaacggattgtttaacttcagaccatccgttcgtccagttcct
cttgaagtgcatattcatggcttcccaggccagcattactgcccacgcatggccagtatg
aacaagccaacattccaagctattcgaagccattccccatccaagcctgtgctgatcttt
gtgtcatccagacgtcagactcgcctcacagctttggatttgatagcctttctggcagca
gaagatgaccctaaacagtggctacacatggatgagcgagagatgagtgacataattgag
atggtgagagattccaatctaaaactgaccttagcctttggtattggtttacatcatgct
ggactccatgaacgtgaccggaaacatgtggaagaactgtttgtgaactgcaaaatccag
attcttattgctacaagcactttagcctggggagtgaacttccctgctcatctggtcatt
gttaaaggtactgagttctatgatggaaaaacaagacgttatgtggactttgcaatcaca
gatgtgctgcagatgatggggcgtgcaggcaggcctcagtttgatgaccaaggcaaagct
gtgatattagttcacgatttgaagaaagacttctataaaaagtttctctatgaacccttc
cctgttgaatcaagtttattggaggtactttctgatcacatgaatgctgaaatttctgct
ggaactatttcatccaagcaggatgccatggattacattacctggacctacttttttcgg
cgtcttatcatgaatcccagctattacaacttagatgatattaatcatgacaccatgaat
aaatatctctccaacctcgtggagaagtctcttgcggatttggaatattcctattgtatt
tcagtaggggaggataatcgcagcctccagtcgctggacttgggccgtatagcctcttat
tactatttgaaacaccaaactatgaaaatgttcaagagccagatgaaagcagattgttgt
gtggaagacttgctttctgttctaacggatgctgcagaatatgcagaccttccagtacgc
cacaatgaagaccaactgaatagtgatctggctaagcatcttcccgttgaagtaaatcca
cattcatttgacagtgcacacaccaaagcccacctactgctccaagcacatttttgccga
gctgctttgccatgccctgattatgctacagataccaaatctgtgctggaccaggccatt
cgaatctgtcaggcaatgttggatgtagcagcaaacaatggctggctcgctacagcactg
aacataatcaatctgattcaaatggtaattcaaggcagatgggttcacgactcctctttg
cttaccctgccgaacattgagcaacaacacctctatctattcaggaagtggaatgtaggc
agaaggaaaagcagtcctaaaagttataaaggcccaattgaatgtcttcctgaattaata
gctgcatgtgaatggagagaggacatatttcattccattgtcgctgatgaactccaggct
gcacagatttcccaggcttggaatttcctgtctaatctacccatcattgaggttaatctg
ctaatcaagggttggtgggaaaatgctccaaatggggaaaatgagaaagctctgccgaat
gtgggaactggaatccgagatgagaagaactggacacaggtccatgcagatcaagaatac
gtactccagatcaatcttcgcagaattagcctggtgcgcagcaagggaaagtacgacagc
aaagccatcacacctcgcttcccaaaggccaaggatgagggctggtttgtcatcctaggg
gaagtagacaagaaggagttaatggctttgaaacgggtgggatacattcgaaatcatagc
ataatctctcttgcattctatactcctgagaccactggaaggtatatctacactctgtat
ctgatgaatgatagctacttggggatggaccagcagtatgacttttatttggatgtgata
ccagcaagcattgttgctcagaccaacaccgaggtctctgatgccatgaatgacctgaca
gtggcataa
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integrated database retrieval system
