Rhincodon typus (whale shark): 109920010
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Entry
109920010 CDS
T06055
Name
(RefSeq) keratin, type I cytoskeletal 13-like
KO
K07604
type I keratin, acidic
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
109920010
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
rtp04812
]
109920010
04147 Exosome [BR:
rtp04147
]
109920010
Cytoskeleton proteins [BR:
rtp04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Types I and II: Acidic and basic keratins
109920010
Exosome [BR:
rtp04147
]
Exosomal proteins
Exosomal proteins of epithelial cells
109920010
Exosomal proteins of other body fluids (saliva and urine)
109920010
Exosomal proteins of colorectal cancer cells
109920010
Exosomal proteins of melanoma cells
109920010
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Filament
TSC22
TPR_MLP1_2
TBCA_PH
COG5_N
DUF16
GAS
Rab11-FIP3
DivIC
DUF6236
Motif
Other DBs
NCBI-GeneID:
109920010
NCBI-ProteinID:
XP_048474006
LinkDB
All DBs
Position
38:complement(5574540..5590973)
Genome browser
AA seq
406 aa
AA seq
DB search
MRRSMISSTTASLGGGLGGGRSLAGGQIISRSSFSGSSQQFGGGGGGGLGLSSFSGSARG
SASMSLSGMSSGALVANEKETMASLNLRLSAYLQKVKDMEEANNKLEMQLKEFQVGKAIT
GIDYAAYDAVIKPLREQILALHLGNARLALDLDNATLAAKDFTNKYENELCIKQSVECDI
ADLKALKDEYILNYSNLEGDIAAANEDLASLKKNHEEELAELKEQVTGTVSVDVSAETST
DLLKQLNEMRDNYEALCKKNENELDIWYKSQVETQTEQTVQVNEAVKTSKLEIKELNSQI
QALEAECHSLLSGNACLEANIQNINDAYYGKLEALKVTISRLEMELMNLRSELDQKGKDY
ANLLNIKMRLETEIENYKKLLDGSTVSLNQSDTKETSNQYNYNNKD
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atgagacgcagcatgatcagctcaacaacggcttcactgggtggggggttaggtggcggg
aggagtctggctggggggcagatcatctccaggtccagtttctctggctcaagccaacag
tttggaggaggaggaggaggaggcctggggttgagttccttcagtgggtcagccagaggt
tcggcctcaatgtctctgtccgggatgtcatccggcgctctcgttgccaacgagaaggag
acgatggcgagcttaaacctccggctttctgcctacctgcagaaggtgaaggatatggag
gaggcgaataacaagctggaaatgcagctgaaagaattccaagttgggaaggccataact
ggcattgactatgctgcttacgatgcagtgatcaaaccactgagggagcagatactggca
cttcatcttggaaatgcacgcctggctctcgaccttgacaatgcaactctggctgctaag
gacttcacaaacaaatatgagaatgagctgtgcatcaaacagtctgtggaatgtgatatt
gcagacctgaaggcgctgaaagatgaatatatattgaattacagcaatttggaaggtgat
atagcggcagcaaatgaagaccttgcaagtctgaagaagaaccatgaagaggaactggct
gaactgaaagagcaagtgactggtacagttagcgtggatgtttccgctgaaaccagcact
gatcttttaaagcaactcaacgaaatgagggacaactatgaagccctttgcaagaagaat
gaaaatgagcttgacatttggtacaaatcacaggttgaaacacagacggagcagactgtt
caggtcaatgaagcagtgaaaacctcaaaactcgagattaaggaattaaacagtcaaatt
caggcccttgaggccgaatgccattctctgctcagtgggaatgcttgcttggaagccaac
attcagaatattaatgacgcgtactatggaaaactggaggccctgaaagtgaccatttcc
agattggagatggagctgatgaacttgagaagtgaactcgaccagaagggtaaagattat
gcgaacctactgaacatcaagatgagacttgagactgagattgagaattacaagaagctt
cttgatggatcaactgttagtctcaaccaaagtgacactaaagaaacgtcgaaccagtac
aactacaacaataaggactga
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