KEGG   Rhincodon typus (whale shark): 109920020
Entry
109920020         CDS       T06055                                 
Symbol
vapb
Name
(RefSeq) vesicle-associated membrane protein-associated protein B/C
  KO
K10707  vesicle-associated membrane protein-associated protein B
Organism
rtp  Rhincodon typus (whale shark)
Brite
KEGG Orthology (KO) [BR:rtp00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:rtp04131]
    109920020 (vapb)
Membrane trafficking [BR:rtp04131]
 Autophagy
  ER-phagy
   Other ER-phagy associated proteins
    109920020 (vapb)
  Other autophagy associated proteins
   ER-mitochondria tethering complex
    109920020 (vapb)
SSDB
Motif
Pfam: Motile_Sperm Ig_CFAP65_4th Cep192_D6 ASH Cep192_D3 ZapB HYDIN_VesB_CFA65-like_Ig
Other DBs
NCBI-GeneID: 109920020
NCBI-ProteinID: XP_048464173
LinkDB
Position
19:complement(56343415..56468046)
AA seq 241 aa
MARPEQLLVLEPPNELKFRGPFTDVVTTNLKLSNPSDKNICFKVKTTAPRRYCVRPNSGV
IDAGTSINVSVMLQPFDYDPNEKSKHKFMVQSMVAPADCQDMEAVWKEAKPDDLMDSKLR
CVFEMPSENEKTHELEMNKVTSTSLKTEASMMTKSTSSSDDLDLRKVMDDCRILKSEVQR
LREENKQLKEDDGLRMRRVPQLGNPILSKNVMIKEEGPATRMIAMVVLFFILGTIVGKLV
L
NT seq 726 nt   +upstreamnt  +downstreamnt
atggcgcgcccggagcagcttctcgtcttggagccgcccaacgagctcaaattccgaggt
cctttcacagatgttgtcactacaaacctgaaactaagtaatccctcagataaaaacata
tgttttaaagtgaagactacagccccgcggaggtattgtgtaaggcctaacagtggagtt
attgatgcaggcacttcaatcaatgtctcagtgatgctacaaccatttgactatgacccc
aatgagaaaagtaagcacaaatttatggttcagtccatggttgctccagcagattgccag
gatatggaagcagtctggaaagaggcgaagccagatgacttaatggattccaagctgcgg
tgtgtctttgaaatgccctctgagaatgagaaaacacatgagctggaaatgaataaagtc
acttccacttcactgaaaacagaagcctccatgatgacaaaatcaaccagctcctcagat
gatttggacttgaggaaagtgatggacgactgcaggatacttaaatcagaggttcagaga
cttcgagaggagaacaaacagttaaaggaggatgatgggctgcgaatgaggagggtgcct
cagcttgggaatcctatactatccaagaatgtgatgatcaaagaagaaggacctgccact
cggatgatcgctatggttgtcctgttctttatcctggggacaattgtgggaaagctggtg
ttgtag

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