Rhincodon typus (whale shark): 109920088
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Entry
109920088 CDS
T06055
Symbol
nsun5
Name
(RefSeq) probable 28S rRNA (cytosine-C(5))-methyltransferase
KO
K15264
25S rRNA (cytosine2278-C5)-methyltransferase [EC:
2.1.1.311
]
Organism
rtp
Rhincodon typus (whale shark)
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rtp03009
]
109920088 (nsun5)
Enzymes [BR:
rtp01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.311 25S rRNA (cytosine2278-C5)-methyltransferase
109920088 (nsun5)
Ribosome biogenesis [BR:
rtp03009
]
Eukaryotic type
Other ribosome biogenesis factors
109920088 (nsun5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NSUN5_N
NSUN5_fdxn-like
Methyltr_RsmB-F
FtsJ
Beta-prop_NUP159_NUP214
Motif
Other DBs
NCBI-GeneID:
109920088
NCBI-ProteinID:
XP_048468618
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All DBs
Position
26:complement(35877823..35896220)
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AA seq
471 aa
AA seq
DB search
MALYVKAAAVLGQLEGKRGSVKTLVYNSGHKNIKQLFALVCETLKYTSVLNEIIGTTDLL
KEKKLQMNVAKVLVYDLLFGKGLKCGGSWKALIMKHRSQLKSALARLKVKRKVSRNEDLI
ETKASSKEACQLPRYVRVNLLKSNTEDVIDYFKREGYTYLGQATSIADLRQLDQKQFISD
LHLSELLVFHSKTDLHEHFLYTAGHIILQDKASCLPAYFLNPPVGSHVIDACAAPGNKTS
HLAAILCNKGKLFAFDLDTKRLATMGTLLLRAGVTCHELANQDFTLVDPSNPKYQDVKYI
LVDPSCSGSGIVNRLNQLTDDEESSSTQRLQALASFQCEALSHALRFPNVERVIYSTCSI
HHEENEDVVEEILQQHGNRIRLVNLMPSWPLRGLDTFPEGPWCIRATPNDTLTNGFFVAM
FEKQLGEKGSEHSRERYKLHTLHKNLISHHLKGHYSMMLVSMMAVSFPKRH
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atggctctctatgtgaaggcggccgccgtcctggggcagctggagggcaagcggggctcg
gtgaaaaccctggtttataacagcggccacaagaatattaagcagctgtttgcgctggtg
tgtgaaacactgaagtacacgtctgtgttgaatgaaattattggcacaacagatctgctg
aaggagaagaaattgcagatgaatgttgccaaggtactggtatatgacctcctgtttggg
aagggcttgaagtgtggtggcagttggaaagcactgatcatgaaacatcgttcccaatta
aaatcagcacttgccagactgaaggtgaaaaggaaagtcagccgcaatgaggatcttatc
gaaacaaaagcttccagtaaggaagcttgccagctgcctcgctacgtccgagtgaaccta
ctgaagagcaacactgaggatgtgattgactacttcaaacgtgagggttacacttacctg
gggcaggctaccagtatagctgatctgaggcagcttgatcagaaacaattcatcagtgat
cttcacctctcagaattgctggtttttcattcaaagacagatcttcacgaacatttcttg
tacacggctgggcatatcattctgcaggataaggccagttgtctaccagcatatttcttg
aaccctccagtaggttctcatgtgattgatgcatgtgcagctcctgggaacaagacaagc
caccttgctgctattctctgtaataaagggaaactctttgcctttgatcttgataccaaa
cgtttggctacaatgggcactctgctgttgagggctggagtaacatgccatgaactggcc
aatcaggacttcacgcttgtggatcccagcaaccccaagtaccaggatgtgaagtatatt
ctagtggacccatcatgcagtggttctggaattgtaaaccgcttgaaccagctcacagat
gatgaggagtcatcatctacacagcgcctgcaggcacttgcgagtttccagtgcgaagcc
ctcagccatgccctgcgcttcccaaacgtggaacgggtcatttactcaacatgttcaatt
catcatgaagagaacgaggatgttgtcgaggagatactacagcaacacggcaaccgaatc
aggctagtcaatctgatgccctcatggccattgcgtggtctggacacattcccggaaggt
ccgtggtgtatccgcgcgacacccaacgacaccttgaccaatgggttttttgttgccatg
tttgaaaagcagcttggagagaaagggtccgagcatagcagagaaaggtacaaattgcac
actctccacaaaaacctgattagtcaccaccttaaaggacattattccatgatgttagtt
tccatgatggcagtgtcctttcctaaaagacattag
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