KEGG   Rhincodon typus (whale shark): 109920102
Entry
109920102         CDS       T06055                                 
Symbol
rrp9
Name
(RefSeq) U3 small nucleolar RNA-interacting protein 2
  KO
K14793  ribosomal RNA-processing protein 9
Organism
rtp  Rhincodon typus (whale shark)
Brite
KEGG Orthology (KO) [BR:rtp00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:rtp03009]
    109920102 (rrp9)
Ribosome biogenesis [BR:rtp03009]
 Eukaryotic type
  90S particles
   Other 90S particles
    109920102 (rrp9)
SSDB
Motif
Pfam: Beta-prop_WDR5 WD40 Beta-prop_WDR3_1st Beta-prop_IFT122_1st WD40_Prp19 Beta-prop_THOC3 Beta-prop_WDR3_2nd WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_TEP1_2nd WDR55 WD40_MABP1-WDR62_2nd Beta-prop_EML EIF3I WD40_Gbeta Beta-prop_CAF1B_HIR1 ASA1 Beta-prop_WDR75_1st Beta-prop_WDR90_POC16_2nd Beta-prop_WDR36-Utp21_2nd WD40_MABP1-WDR62_1st Beta-prop_WDR36-Utp21_1st Beta-prop_TEP1_C WDR90_beta-prop_4th CFAP251_N NBCH_WD40 Beta-prop_SCAP Beta-prop_WDR41 Beta-prop_DCAF12 DSE1_N PEP5_VPS11_N ANAPC4_WD40 Beta-prop_DCAF4 TRM82_WD Beta-prop_IFT140_1st Beta-prop_RIG_2nd Beta-prop_SPT8 Beta-prop_VPS8 Beta-prop_ACSF4 Beta-prop_WDR19_1st Beta-prop_NOL10_N Beta-prop_HPS5 PAC11 Beta-prop_Aladin Beta-prop_Vps41 Beta-prop_RIG_1st WDR54 WD40_CFAP43 RGM_C
Other DBs
NCBI-GeneID: 109920102
NCBI-ProteinID: XP_048462557
LinkDB
Position
16:complement(54543996..54571721)
AA seq 278 aa
MHILSMAISSDGKYLATGDQNKLILIWDAASCQHLYTFKGHKDAVSGLSFRKGTHQLYSA
SHDRSVKVWNVDQNAYVETLFGHQDAITGLDSLSRERCVTAGGRDRTVRVWKIVEEAQLV
FHGHESSIDCIQLVNEEYMVSGGDDGSLALWTVTKKKPLVTVSKAHGIHGDPAIQQPYWI
TSVAALLNSDLIASGSHNSKIRLWKCGEGFKTLEPLFDIPMVGFVNCLKFSSSGDFLVAG
MGQEHRLGRWWRLKEAKNGICIIPLKKTPPKQQSEDNM
NT seq 837 nt   +upstreamnt  +downstreamnt
atgcacatcctgtccatggcaatatcctccgatggcaagtacctggctacaggagaccaa
aacaaactgatcttaatctgggatgctgcctcgtgtcaacatctttacacattcaaggga
cataaagatgcggtatcgggtctgtcctttcggaaaggcacccatcagttatacagtgcc
tcacatgaccgctcagtcaaagtctggaatgtggaccagaacgcctacgttgaaactctg
tttggtcaccaggatgccatcacaggtctggacagccttagtcgagagcgctgtgtcacc
gcagggggccgagaccggacggtgcgtgtctggaagattgtcgaagaagcacagcttgta
tttcatggtcatgagagttccattgactgcatacaactggtgaatgaggagtacatggtt
tctggaggcgatgatggctccttggccctttggacagttacgaagaagaagcctctggtg
acggtcagcaaagctcatggtatccatggagacccagcgatacagcagccatattggatt
acctctgtggcggcattgctgaacagtgatttgatagcctcaggttcgcataattccaaa
atcaggctctggaaatgtggagaaggttttaagacattggagccactgttcgacattccc
atggtcggctttgtgaactgtttgaagttttctagttcaggtgacttcttggtggctggc
atggggcaagagcacaggttaggccgctggtggagactaaaagaagccaagaatggaatc
tgtattatcccactgaaaaagacaccacccaaacaacaatctgaagacaacatgtag

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