Rhincodon typus (whale shark): 109920180
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Entry
109920180 CDS
T06055
Symbol
cdx1b
Name
(RefSeq) homeobox protein CDX-1b isoform X1
KO
K09312
homeobox protein CDX1/4
Organism
rtp
Rhincodon typus (whale shark)
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rtp03000
]
109920180 (cdx1b)
Transcription factors [BR:
rtp03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: HOXL
109920180 (cdx1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Caudal_act
Homeodomain
Homeobox_KN
DUF707
Motif
Other DBs
NCBI-GeneID:
109920180
NCBI-ProteinID:
XP_048459838
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All DBs
Position
12:64007645..64063013
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AA seq
262 aa
AA seq
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MYVSYLLDKESSMYPNSVRHPSLNLSPQNFAPPPPPPQYSDFAGYHHHVSGISTDPHHPQ
PAGTWSSPYVPPRDEWHGYGTGAPTVTTSPGQLAFGPSDFTPVQPQGGAGLLPSMSAIVP
QLSPSSPRRNPYDWMRRNLQPNPQAGKTRTKDKYRVVYTDHQRLELEKEFHYSRYITIRR
KSELAIALGLSERQVKIWFQNRRAKERKINKKKMQQQSQQASTTTPTPPGVPGPAPAIGL
VSSSSNLVSQSIPLTIKEEYLS
NT seq
789 nt
NT seq
+upstream
nt +downstream
nt
atgtacgtcagttacctcctggataaggaaagcagcatgtatcctaattcggtgaggcac
cccagcttaaacctaagcccccagaactttgcaccccctcctccccctccacagtattcc
gactttgccggttaccaccatcatgtctctgggatcagcacggaccctcaccaccctcaa
cctgctggcacctggagctccccttacgtgccgccccgggatgaatggcacggctacggg
acaggtgcccccaccgtcaccacctcgccagggcagctggcattcggcccgtccgacttt
acccctgtgcagccccagggtggtgctggcctgctgccctccatgagcgccatagtcccc
caactctctcccagctctccgaggcggaatccttatgactggatgaggcgcaatcttcag
cccaatccgcaagcaggcaaaaccagaacgaaagacaagtaccgagtggtgtacactgac
catcaaaggctggagttagagaaggaatttcactacagcagatatattaccattcgcagg
aagtcagaactggcaattgcattaggattgtctgaacggcaggtgaagatctggttccag
aatagacgagcaaaagagagaaaaatcaacaaaaagaagatgcagcaacagtcccaacaa
gccagtacgacaacgcccactccacctggagtccccggccctgcgccagccatcggcctg
gttagcagcagcagtaaccttgtctcgcaatccattccactgactatcaaagaggaatac
ttgtcctaa
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