Rhincodon typus (whale shark): 109920237
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Entry
109920237 CDS
T06055
Symbol
si:ch211-283g2.1
Name
(RefSeq) sodium- and chloride-dependent GABA transporter 1
KO
K05039
solute carrier family 6 (neurotransmitter transporter, taurine) member 6
Organism
rtp
Rhincodon typus (whale shark)
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rtp02000
]
109920237 (si:ch211-283g2.1)
Transporters [BR:
rtp02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
109920237 (si:ch211-283g2.1)
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GFIT
Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
109920237
NCBI-ProteinID:
XP_048468321
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Position
26:24317733..24409070
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AA seq
566 aa
AA seq
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MKNIEMSNSMEKINSVKTRKACDITAQIVENANKNENAQTRVTWTRKIEFTLAGIGYSVG
LGNVWRFPFLCYRSGGGAFLIPFFIMFALLGIPLLYLEISIGQYLRTGPVESLAKICPLL
KGVGLATVAISFVMSTYYNLIICWAMYYLIHSFQNPLPWHSCNNTWNIQETCTDSITTNN
ITVSASQQFFDYNVLQKTNGLDDLGNMRWELFGLLILAWVIVYFCIFKGVTWTGKVWVYA
AVQVFNSIGIGFGSLISMSSYNKPDNNILRDTLAISLTNAATSIFSGFVIFSAFGYMSHM
INIPIDDIAVDGPGLVFVVYPEAFVTMPVSPLWAVLFFIMLLFLGLDSEFAMVEVMVTSL
LDANQGWLLKYLKRKEFVVLGVCVVAFMLGIPNVTQGGIYVFQLLDHYTAQVSIVFLAFF
EIVAVCCIYGLPRLSQNIEEMLGKKPNIYLRVCWLLSPVLILIIMVFVIIDFEPVRYGTY
QYPEWGQGLGWVIAFASLIWIPVGVIHTLLTLKGSFHERFIKSTTPFGLDYDSKQTGVAR
TEASQVIPMAGGSPSQQNEILKNTSI
NT seq
1701 nt
NT seq
+upstream
nt +downstream
nt
atgaagaatattgagatgtccaactccatggaaaagataaactcagtgaagacaagaaaa
gcatgtgatatcactgcacaaattgttgaaaatgctaataagaacgaaaatgcccaaact
agagtgacttggactcgaaagattgagtttacattggctggaatcggctattcagtgggt
ttgggcaatgtctggagattccccttcttgtgctataggagtggaggaggcgcatttttg
attcccttcttcattatgtttgcgctgctcggaatcccacttctctatttggaaatatct
attggacagtatttaagaactggaccagttgaatctttagccaaaatctgtcccctgctc
aaaggtgttggtttagcaacagtggccatttcctttgttatgagcacatattacaacctt
atcatctgctgggccatgtattatctcatccactcctttcagaacccactgccctggcac
agctgcaacaatacttggaatattcaagagacctgcacagatagtattaccaccaacaac
attactgtttcagcaagtcagcaattctttgattacaatgttcttcagaagacaaatggt
ctggatgaccttgggaatatgcgctgggagctttttggtcttctgattcttgcatgggtg
attgtttatttctgcatatttaaaggggtaacatggactggaaaggtgtgggtttatgct
gctgtccaggtctttaattccattggcattggctttggctcattaatttccatgtcaagt
tacaacaagcctgacaacaatattcttagagatacgttggccatctcattaactaatgca
gccacaagtatcttttctggatttgtcattttctctgcgtttggctacatgtcccatatg
attaatatccctatcgatgatattgctgtagatggcccaggattggtgtttgtggtttac
ccagaagcctttgttacgatgccagtttctcctctgtgggcagttctgtttttcattatg
ttactgtttttggggcttgatagtgagtttgcaatggttgaagtgatggtgacaagtcta
ttggatgccaatcagggttggctactgaaatatttgaaaaggaaagaatttgtggtgttg
ggtgtctgtgttgtagcctttatgttaggaattccaaatgtcacacagggtggaatatat
gttttccagctcctagaccactatactgctcaagtatccattgttttcttggcttttttt
gagattgttgctgtttgctgtatttacggtctccctcgattgtcacagaacattgaggaa
atgctgggaaaaaagccaaatatttacttgcgtgtgtgttggctgctgtcgcctgtactg
atacttattattatggtgtttgttatcattgactttgagcctgtgcgttatggcacctac
cagtacccagagtggggtcaaggtcttggttgggtcattgctttcgcttcgctcatttgg
atccctgttggagtcatccatacgttactcacattgaaaggctcattccacgagagattc
attaagtctaccactccttttggtctcgattatgacagcaaacagacaggagttgcaagg
actgaggcttcacaggttatcccaatggctggcgggtcaccttcacagcaaaatgaaata
ttgaagaacacttccatttaa
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