Rhincodon typus (whale shark): 109920275
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Entry
109920275 CDS
T06055
Symbol
col8a2
Name
(RefSeq) collagen alpha-2(VIII) chain
KO
K23455
collagen type VIII alpha
Organism
rtp
Rhincodon typus (whale shark)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
C1q
BclA_C
Motif
Other DBs
NCBI-GeneID:
109920275
NCBI-ProteinID:
XP_048449912
LinkDB
All DBs
Position
Unknown
AA seq
639 aa
AA seq
DB search
IPVILPSDLRGEKGAPGKPGPRGPPGLPGIPGKPGNGKPGLQGRTGPPGVPGLVSIGKPG
IPGQPGKPGIRGIPGPKGDLGPRGDMGPRGLPGPPGLPGPSGFSVIGKPGAPGADGSPGL
RAEPGLKGERGPPGERGPKGENGYGKPGAPGLRGKEGAPGKPGPPGQPGRGKPGVNGLPG
GPGEKGEAGQQGEPGLPGPPGPQGPAGKPGLNGIGKPGQDGLAGIPGSRGQKGQAGPPGA
RGLPGAPSYAKPGINGLKGERGIPGKPGAPGLNGEPGLNGFHGEPGAKGEPGPPGPVGPK
GFMGKPGIPGVKGDIGIIGPPGLKGMPGDHGQNGLPGKPGVPGERGLHGPPGSPGKIGQK
GEAGYTGVPGPPGIAGPIGPKGEPGQVGQPGPRGSSGIPGLQGPSGPIGPTGLPGPKGEL
GPPGLPGEGTVGEPGMTGPIGRPGSPGIQGMKGAQGPPGPPGPPGPPGLLINGELTGVSG
LQVDGPVDGVKIPGNGKPEYGMGEISAKVAPAFTAILTKPFPPSGAPIKFDRILYNGQSG
YNPATGVFVCQIPGVYYFAYHVHVKGTNIWVALYKNNVPATYTYDEYKKGYLDQASGSAV
LELKENDQVWVQMPSDQANGLYSTEYIHSSFSGFLLCPT
NT seq
1922 nt
NT seq
+upstream
nt +downstream
nt
aaattccagtgattcttccctctgacctcaggggtgagaaaggtgctccaggaaaacctg
ggccaagaggacctcctggattgccgggaattccaggaaaaccaggaaatggaaagccgg
gtcttcaaggacggaccggaccacctggagtgccaggacttgtaagcattggaaaaccag
gaattccaggacaacccggtaaaccaggtatcagaggaattccaggacctaaaggtgact
taggacccagaggggatatgggacccagaggccttcccgggcctccaggattacctggac
cttcaggtttctctgtcattggtaagccaggagctccaggagcagatggatcaccagggc
ttagagcagagccaggtctaaagggagaacgtggacctccaggggagcgtggtcccaaag
gtgaaaatgggtatggaaaaccaggtgctccaggtctgagaggtaaggaaggggcaccag
gtaagcctggacctccaggccagcctggaagaggaaagccaggagttaatggtttacctg
gtggccctggtgagaaaggggaagctggacaacaaggtgaaccaggacttccaggtccac
ctggtcctcaggggccagcgggaaagccaggattgaatggcataggaaagccaggtcagg
atgggttagcaggaattccaggatctagaggtcaaaaggggcaggctgggccacctggtg
ctcgtggtcttcctggagcaccatcatatgcaaagcctggaataaatggacttaaaggtg
agcggggcattcctggaaagccaggtgccccaggactcaatggtgaaccaggattaaatg
gctttcacggtgaacctggagctaagggagagccaggccctccaggtcctgtgggcccta
aaggattcatggggaaaccaggtattccaggtgtcaaaggtgacattgggatcattgggc
caccaggtctgaaaggaatgccaggtgaccatggacagaatgggttacctgggaaaccag
gtgtgcctggtgagagaggtttgcacggacctccaggatcaccaggcaaaattggtcaaa
aaggtgaagctgggtatacaggggtccctggaccaccaggaatagctggtcctataggac
ccaaaggagaaccagggcaggtaggtcaacctggaccgaggggctcttcaggaatacctg
gtcttcaggggccatcgggtccaataggacctacaggtttaccaggtcccaaaggagaac
taggaccaccaggtttgccaggagaaggcacagtaggtgaaccgggaatgacaggaccaa
taggtcggcctggaagtcctggaatacaaggcatgaagggagcccaaggtcctccagggc
cacctggtccaccaggcccaccgggactcctcattaacggggaattaacaggtgtatccg
gccttcaggtagatggacctgtggacggtgtgaaaataccagggaatggaaaaccagagt
atggaatgggagaaatctctgcaaaagtagctcctgccttcacagcaattttgacaaagc
catttccaccatcaggggcacccattaagttcgataggattttatacaatggacaaagtg
gatataatccagcaactggagtgttcgtgtgtcaaataccaggtgtttactattttgctt
atcatgtgcatgtcaagggaaccaatatatgggtagcactgtataagaataatgtgcctg
caacatacacatatgatgaatataagaaaggatatcttgaccaagcatcgggaagtgctg
tactggaacttaaagaaaatgaccaagtatgggtccagatgccttcagaccaagccaatg
gattatattctactgaatacatccattcctctttctcaggattcttactttgtccaacat
aa
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