Rhincodon typus (whale shark): 109920295
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Entry
109920295 CDS
T06055
Symbol
hoxd3a
Name
(RefSeq) homeobox protein Hox-D3a
KO
K09303
homeobox protein HoxA/B/D3
Organism
rtp
Rhincodon typus (whale shark)
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rtp03000
]
109920295 (hoxd3a)
Transcription factors [BR:
rtp03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: HOXL
109920295 (hoxd3a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4074
Homeodomain
DUF7255
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
109920295
NCBI-ProteinID:
XP_020376090
LinkDB
All DBs
Position
7:complement(42026171..42063889)
Genome browser
AA seq
408 aa
AA seq
DB search
MLFDKGVKTLSFRNSEMQKATYYDNSGIFGGYTYQKTNAYSYNSSHQAYPSSSVESDYQT
STCPIQTSSVRVPNHKPNDINGNCMRTSGSQGTAQPPSINEPQQPPPLPPSPNASNTSTQ
KRTKSMSNSSTSPAATLTKQIFPWMKESRQNAKQKNNCTVAGDNCEDKSPPGPSSKRVRT
AYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKKDQKSKGIM
HSPVGQSPERSPLLNSQNNIGFSNQLPTVNSLSYEAPSPTSFTKSQQNMYGLAAYTAPHS
SCLPQQKRYPGTEYDHLQGNGSFTNHNLQGSPVYVGGNFVDSMPASGPMFNLSHLPHPSS
ATVDYSCAAQIPGNHHHGPCDPHPTYTDLTPHHTSQGRIQEAPKLTHL
NT seq
1227 nt
NT seq
+upstream
nt +downstream
nt
atgctcttcgataagggtgtcaagaccctatcatttcgaaatagcgagatgcaaaaagcg
acttactacgataactccggaatattcggcggttacacctaccaaaagactaacgcatac
agctacaattctagccaccaggcctacccgtcatcatcagttgaaagtgattatcaaacc
tcgacgtgccccattcagacatctagtgtcagagtcccaaaccataaacccaacgatatt
aatggcaattgtatgagaacaagcggcagccagggcactgcccagcccccaagcatcaat
gagccacagcagccacctcctttaccgccctcacccaatgcaagcaacacctcaacacag
aaaagaaccaagtcaatgtcaaattcttccaccagcccagctgctactctcacgaagcaa
atctttccatggatgaaagaatctcgtcaaaatgccaagcagaaaaacaactgcacagtt
gcaggtgacaattgtgaggataaaagcccaccaggtccatcctccaagagagtccgtact
gcctacaccagcgcacaactcgtggaactggaaaaagaatttcattttaatcgttatctg
tgccgtcctcggcgagttgaaatggcaaacttattaaaccttactgaacgccagattaaa
atctggttccagaacagaagaatgaaatacaaaaaagaccaaaagtccaaagggatcatg
cattcccccgttggacagtctccagagagaagtccacttttgaattcgcaaaataacatt
ggattctcaaaccagctccctactgtcaacagtctgagttacgaagctccttcgcccaca
tcgttcaccaaatcccaacaaaacatgtatggtttggctgcgtacactgcaccacacagt
agctgtctaccccagcaaaaaaggtacccaggcacagagtacgatcatctgcagggcaat
ggtagttttaccaatcataacttgcagggcagccctgtgtatgttggagggaacttcgtt
gattcaatgccagcttctggtcccatgttcaaccttagccatcttcctcatccttcatca
gctactgtggactatagctgcgctgctcaaataccgggcaatcaccatcatggaccttgt
gatccccatcctacatatacagacctgactcctcatcacacatctcagggaagaattcaa
gaagcgcccaaactaacacatctgtaa
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