Rhincodon typus (whale shark): 109920332
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Entry
109920332 CDS
T06055
Symbol
ss18
Name
(RefSeq) protein SSXT isoform X1
KO
K15623
protein SSXT
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
109920332 (ss18)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rtp03036
]
109920332 (ss18)
Chromosome and associated proteins [BR:
rtp03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
109920332 (ss18)
GBAF(ncBAF) complex
109920332 (ss18)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SSXT
Motif
Other DBs
NCBI-GeneID:
109920332
NCBI-ProteinID:
XP_048452189
LinkDB
All DBs
Position
4:complement(117293669..117351913)
Genome browser
AA seq
373 aa
AA seq
DB search
MSVAFATPRQRGKGEITPAAIQKLLDENNHLIQCIMDYQSKGKTAECSQYQQVLHRNLVY
LATIADSNQNMQSLLPAPPSQSMPMGPGGMNQLPPGHSMGTDSMVGGGGGGPPTSHMQNQ
MNGQIPGPNHMPVQGPGQPSMANASVSMPTSSHGSMGGYSHSVTSSQGMPVQSQMNMNPG
QSMSNYGPRTNMNMQPSQGPMMHQQASTSQYNMPQGASQHYPNQPPMPMMNPVNQANHMM
GQRQMPPYRPAQQGPLQQYAGQEDYYNDQFNHGQGTPESMNQQYYPDGNSQYSQQQETYQ
QGPPQQQGYAQQQYTTQQGYPAQQQGYGSSQPPPNQYPNYPQGQGQQYGGYRPPQPGPPQ
QQQRPYGYEQNLQ
NT seq
1122 nt
NT seq
+upstream
nt +downstream
nt
atgtcggttgcatttgctactccccggcagcgcgggaaaggtgaaattacacctgccgcc
attcagaagttactggatgaaaacaatcatcttatccaatgcataatggattaccagagc
aaggggaaaactgctgaatgttcgcagtaccagcaagtgcttcacagaaatttggtctat
ctggcaacaatagcagattccaatcagaacatgcagtcactcttgccagctcctccctca
cagtccatgccgatgggaccagggggaatgaaccagctccctcccgggcacagcatgggc
acagacagtatggtcggtggtggaggaggagggccccctacgtcgcacatgcagaaccag
atgaacggacaaatacctggcccgaaccacatgccagtgcaaggaccaggccaacccagt
atggccaatgcctctgtcagcatgccaaccagtagccacggttccatgggtggctacagt
cattcggtgacatcttcacagggaatgccagtgcagagccagatgaatatgaacccaggt
caatcgatgagtaactacggccctcgaacaaatatgaacatgcagccgagccaaggcccc
atgatgcaccagcaagcgtcaacctcgcagtacaatatgccacagggagcgagccaacat
taccccaaccagccgcccatgcccatgatgaatccagtgaaccaggcgaaccacatgatg
gggcagagacagatgccaccatacagaccagctcagcaaggtcctctccagcaatacgca
gggcaggaggattactacaatgaccagttcaatcatggacaggggaccccagagagcatg
aaccagcagtattatcctgatggtaactcgcagtacagtcagcaacaagagacctaccaa
caaggaccacctcaacagcaaggctatgcacagcagcagtacacaactcaacaaggctat
ccagcccagcagcaaggttatggttcctcccaacctcctccaaaccagtacccaaactat
ccacagggccagggtcagcagtatggaggctacagacccccgcaacctggaccaccgcaa
cagcagcagaggccttatgggtatgagcagaacttgcaatga
DBGET
integrated database retrieval system
