Rhincodon typus (whale shark): 109920342
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Entry
109920342 CDS
T06055
Symbol
farp2
Name
(RefSeq) FERM, ARHGEF and pleckstrin domain-containing protein 2 isoform X1
KO
K06082
FERM, RhoGEF and pleckstrin domain protein 2
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
109920342 (farp2)
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Gene cluster
GFIT
Motif
Pfam:
RhoGEF
FERM_C
PH
FERM_N
FERM_M
FA
SOS1_NGEF_PH
IQ_SEC7_PH
RHG20_PH
PH_11
Motif
Other DBs
NCBI-GeneID:
109920342
NCBI-ProteinID:
XP_048460171
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Position
13:68610270..68772947
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AA seq
1093 aa
AA seq
DB search
MDEMEGTYRVLQTPGARLGTQTNAAISTLEPGQSLSLASSLKTRGRGVQLMVQLLDDVQE
QIEVEQKAYGQALMDEICHRLNLVESDYFGLEFRNSRGNEIWLEPAKLIVKQVRRPKNTV
FRLSVKFFPPDPGQLQEEYTRYLFALQIKRDLAENKIMCNENTSALLVSHLLQSEIGDYD
ETQDLEYLKSNTLLPNQKMLQEKIMEFHRQNIGQTPAESDFQVLEIARKLEMYGIRFHPA
SDREGTKINLAVTHMGVVVFQGNTKINTFNWAKIRKLSFKRKRFLIKLHPEVHDSYQDTL
EFLLADRDLCKIFWKNCVEYHSFFRLMDQPKPKTKPVLFSRGSSFRYSGRTQKQLVDYMR
ESMIKTIPYQRRHSRARISAQTSSADVPKQSLSFTEGIEVPGSPSSATVSFQSVQSIQKT
VADSRPIHPENSKVLLVSKHSARRTPSEVKRSPTLEDSWKTSDWLSPTTLQGSVAEAAGS
CSRSSSGCDERSALTRQDGVSDRRFPQRNDNDEDDYTTGSLVDSLQLSPHATRSPLNVLL
PGSQASNLDLPGQAQSPLQSPILSDASSTRVDDEDDDRRKRCPADKAYFIAKEILTTERT
YLKDLEVITVWFRSAVIKESAMPEGLMTLLFSNIDPIYEFHRGFLKEIEQRLALWEGRSN
AHVKGDYQRIGDVMLRNMCALKEFTGYLQKYDEVLMELERATKQSKKLEAVYKEFELQKV
CYLPLNTFLLKPIQRLMHYKLILERLCKHYCPDYRDYSDCRDALKEVRDMSAQLHSSLIR
LEHFQKLTELRRDLIGVENLILPGRDFIREGCLYKLTKKGLQQRMFFLFSDMLLYTSKGV
TTSNQFKVHGQLPLYGMIIEESENEWSVPHCFTIYSAPKTLVVAASSRVEMGKWIEDLTM
AIEMVKKSNEKRDTTLESNISDRSNRSSDEVSLEQESEDDTHSSHSSLDKQTHHRANTTV
HVCWHRNTSVSMLDHSVAVENQLSGYLLRKFKNSSGWQKLWVVFTNFCLFFYKTHQDDYP
LASLPLLGYVASIPTDGDRICKDYVFKLQFKSHVYFFRAESEYTFERWMEVIKSATSSPG
RMIHLSQKDGWLG
NT seq
3282 nt
NT seq
+upstream
nt +downstream
nt
atggatgagatggaaggaacatatcgagtgttgcagactccaggggctcgacttggaaca
cagacaaatgcagcgatcagtacattggagccagggcaaagcctctctctggcatcgtct
ctcaaaacccggggcagaggggtccaacttatggtccagttgctggatgatgtacaggaa
caaattgaagttgagcaaaaagcctatggccaggctctgatggatgaaatctgccaccgt
ctcaaccttgtcgagagtgattactttgggctggaatttcgcaacagccggggaaatgag
atttggcttgaacctgcaaaacttattgtgaaacaagtgcgaagaccaaagaacacagtg
ttcaggctttcagtgaagtttttcccccctgatcctggccagctgcaggaggagtacacg
agatacctgtttgcgctgcagattaagagggacctggcggaaaacaaaatcatgtgcaat
gaaaatacgtctgctctccttgtctctcaccttttgcagtctgaaattggagattatgat
gaaactcaggatctggagtacctcaagagtaacacgctcttgccaaaccagaaaatgttg
caggaaaagattatggaattccacaggcaaaacataggccagactccagctgaatcagat
ttccaggtattagagatagcaaggaaacttgaaatgtatggaattcggtttcatccggcc
tctgacagggaagggacaaaaatcaatctggctgtcacccacatgggcgttgtggtgttt
cagggcaatacaaaaattaacactttcaactgggcaaagatccggaaacttagcttcaag
agaaaaaggttcctcatcaagctccatccagaagtccatgattcgtaccaggatacattg
gagttcctgctggctgatcgtgacctgtgtaagatcttctggaagaactgtgttgagtac
cacagctttttcagactcatggaccaacccaaaccaaagaccaagccagttttattcagc
aggggctcctccttcagatacagtggcaggacacagaaacagcttgttgactacatgcga
gagagtatgattaagactattccttatcagaggcggcacagcagagcacgaatctcagct
cagacttcgagcgcagacgtgcctaaacagagtctatcgttcactgaaggcatagaggtt
ccaggctccccatcttcagctactgtctcctttcaatccgtccaatctatacagaagact
gttgctgacagtcggcctattcaccctgaaaacagtaaagttctgctcgtcagcaagcac
tctgctcggaggaccccatcagaagtgaagaggagtccgacgctcgaagattcgtggaag
acttctgattggctctctccgacgacgttgcaaggttctgttgctgaagctgcaggcagc
tgcagtcgctcctcttcgggttgtgacgagcgcagtgctttaactagacaggatggtgtt
agtgacaggaggttccctcagagaaatgacaatgatgaggatgactataccacaggtagt
ttagttgacagcctgcaactgtctcctcatgccacaaggagccctttgaatgtgctactt
cctggatcccaggcgtccaacctggatttgcctggtcaggcacagtcaccattgcagagt
ccgattcttagtgatgccagcagtaccagggtggatgatgaagacgacgaccggcggaag
cgttgcccagctgacaaggcttacttcattgcaaaagaaatcctgaccacagagaggacg
tacctgaaggatttggaagtcatcactgtgtggtttcgaagtgctgtcatcaaagagagt
gcaatgccagagggactaatgacactgctgttttccaacattgacccaatttatgagttt
catcgtggatttctgaaagagattgaacagaggctggctctgtgggaaggaaggtccaat
gcacatgtgaaaggagattatcagagaattggtgatgtcatgcttcggaacatgtgtgct
ctcaaggagttcaccggttatctacagaaatacgatgaagttctaatggaattggagaga
gccaccaagcaatcaaagaaactagaggctgtttacaaagagtttgagctgcagaaggtc
tgttacttacctctgaacacattcctgctgaagcccatccagaggctgatgcattacaaa
ctcatcttagaacgactctgcaaacactattgccctgactatcgagattacagcgactgc
agagatgccctgaaggaggttagggacatgagtgcccagttacacagcagtttaatcagg
ctggagcatttccagaaactcacggagctgcggcgagatcttattggcgttgagaatttg
attctgccaggaagggacttcattcgtgaaggctgtctgtataaacttaccaaaaaaggc
ctgcagcagaggatgtttttcctgttctctgacatgctgttgtacacaagcaaaggagtg
acgaccagcaaccagtttaaagtacatggtcaacttcctctgtacggaatgataatcgag
gagtctgagaatgagtggtctgttccacattgtttcaccatatactctgctccgaagaca
ctagttgtggcagccagctcgcgtgtggagatggggaaatggattgaggacttgaccatg
gccattgagatggtgaagaaatcaaatgagaagagagatacaacgctggaaagcaacatc
tctgatcgttcaaaccgatcttcagacgaagtgtcactggagcaggaatctgaagacgac
actcactcctcccacagctcgttggacaagcagacccaccaccgtgccaacaccacagtg
cacgtgtgctggcatcgcaacacgagtgtctccatgttggaccacagtgttgcagtggag
aaccagctctcgggttacttgctgaggaagttcaagaacagcagtgggtggcaaaaactt
tgggttgtcttcaccaacttctgcctcttcttctacaagacgcaccaggatgactatccc
ctggccagtcttcctctattaggctatgttgcaagcatacccacggatggtgaccgcatt
tgcaaagattatgtcttcaaactgcagttcaaatctcacgtctacttcttcagagcggag
agcgagtacacatttgaaaggtggatggaagttatcaagagtgcaaccagttctccagga
cggatgatccatctcagccagaaggatggttggttgggctga
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integrated database retrieval system
