Rhincodon typus (whale shark): 109920447
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Entry
109920447 CDS
T06055
Symbol
rab11fip3
Name
(RefSeq) rab11 family-interacting protein 3 isoform X1
KO
K12485
Rab11 family-interacting protein 3/4
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
109920447 (rab11fip3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rtp04131
]
109920447 (rab11fip3)
Membrane trafficking [BR:
rtp04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
109920447 (rab11fip3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RBD-FIP
EF-hand_7
EF-hand_8
EF-hand_6
EF-hand_9
EF-hand_1
HALZ
DivIC
ZapB
Motif
Other DBs
NCBI-GeneID:
109920447
NCBI-ProteinID:
XP_048465427
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All DBs
Position
21:complement(35281977..35383250)
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AA seq
642 aa
AA seq
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MEPAPGPEGAKSSGVELEPPAPRNTGFETECERLRVVFDLFDLDGEGLIRLEDFCQIASS
YGAEQVKELTKYLDPAGLGVIAFDDFCRGIAAIKNGDSDSQNYDAGIGNEDNVLPCTEEF
EDFICFETNEVTDSAYMGSESTYSECETFTDEDTGTLVHHGAHDELETDSAIDATLNSEF
TDTLEEPENSVVFNGEIKTHQHHFSMSSNISPLNTEEHFEDYGENNEIDFDFATSSLCQD
GGNNINSHFNRSSLLSPSDHFTSTLQSVIGEEMLEFYCTQCHKQINRLEDLSTRINTLEM
NSPIMRLSSKKVARHLQQNSADSIDRMENLSTKTLGLVPLDLTDQVIFLEKRVTELEQDN
TTSGEMHNRLRQENLQLVHRANALEEQLKEQETRSEQMLLEELKKQKESLSKVEREQVIE
IESLHTRLHQLDEENGELRACIPCLRANAERLEEEKQKLLDEVDELTHKLKEEQQNNQKL
SDKLLHKQYQFQKEKEATQELIEDLRKQLEHLQLFKLETEKSRGRSSSIGLQEYNCRNRE
TELEQEIKRLKQDNENLKEQNDELNGQIINLSIQGAKSLFTASIAESLAAEISSVSRDEL
MDAIQKQEEINYRLQDYIDRIVVAIMETNPAILEIKHTEAQS
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
atggagcctgctccggggccggaaggggccaagagctcaggggtagagttagagcccccg
gcgcccaggaacacaggatttgagacggagtgcgagaggctgcgggtggtcttcgatttg
tttgacttggacggggaagggttgatccggctggaagatttttgtcagatcgccagtagc
tacggcgcggagcaggtaaaggaattgacaaaatacttagatcctgctggtcttggggtc
attgcatttgatgatttctgtcgaggaattgctgctattaaaaatggagattctgatagc
cagaactatgatgctggaattgggaatgaggataatgtgttaccctgtactgaggagttt
gaggatttcatctgttttgagactaacgaggtgacggatagtgcttacatgggctctgag
agcacctacagtgagtgtgagacattcacagatgaggacactggcacacttgttcaccat
ggtgcacatgatgagttggagacagacagcgctattgacgccacgctgaactcagaattc
acagatacacttgaagagccagaaaatagtgtcgtttttaatggggaaataaagacccac
caacatcatttctcaatgagctccaacatttcccctcttaacactgaagagcactttgaa
gattatggagagaacaatgagattgactttgactttgctaccagtagtctgtgtcaggat
ggaggcaataatatcaatagtcacttcaatcgttcatcacttctctctcccagtgatcat
ttcacttcaactttacaaagtgtaattggggaagagatgctggagttttactgcacccag
tgtcataagcaaatcaatcgcctggaagatctgtccacccgtatcaacactcttgaaatg
aatagccccatcatgagactcagcagcaagaaggtggctcggcacctccagcagaacagt
gcagacagcattgacagaatggagaatctatccacgaaaaccctgggcttagtcccgttg
gatctcactgatcaggttattttcctggagaagcgagtcactgagctggagcaagacaat
acgaccagtggagaaatgcacaaccgcctaagacaggagaacctgcagctggtacacagg
gcaaacgcattggaggaacagcttaaggagcaggagaccagatctgagcagatgttactg
gaggaacttaagaaacagaaagaaagtctgagcaaagtggaacgagaacaggtcattgaa
attgaaagtctgcataccaggttacaccagctggatgaggagaatggggaattacgagca
tgcattccctgccttcgggctaatgctgagagactggaagaggagaagcagaagctgttg
gatgaagtggatgaactcacacacaaactgaaggaagagcaacagaacaaccagaaactg
tcagataaactcttacacaagcagtaccagtttcagaaagaaaaggaagccactcaagag
cttatagaagatctgcggaagcaattggaacacctacaactcttcaagctagaaacagag
aagtcacgtgggcgttcaagcagtattgggctgcaggaatacaactgccgtaatagagag
actgagctggagcaagagattaaacggcttaaacaagataacgaaaatctgaaggagcaa
aatgatgagctgaatggacagattattaacctgagtatccagggagcaaagagtcttttc
acagcctctatcgcagaatcactggctgcagaaatcagctctgtttctagggatgagctt
atggatgcaattcagaaacaagaggagatcaactacaggctgcaggattacattgaccga
attgttgtggcaatcatggagaccaaccctgcaattcttgagatcaaacatactgaggca
cagtcctag
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