Rhincodon typus (whale shark): 109920465
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Entry
109920465 CDS
T06055
Symbol
si:dkey-181m9.8
Name
(RefSeq) E3 ubiquitin-protein ligase RNF31
KO
K11974
E3 ubiquitin-protein ligase RNF31 [EC:
2.3.2.31
]
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp04217
Necroptosis
rtp04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
109920465 (si:dkey-181m9.8)
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
109920465 (si:dkey-181m9.8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rtp04121
]
109920465 (si:dkey-181m9.8)
Enzymes [BR:
rtp01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
109920465 (si:dkey-181m9.8)
Ubiquitin system [BR:
rtp04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
109920465 (si:dkey-181m9.8)
Multi subunit type E3
LUBAC complex
109920465 (si:dkey-181m9.8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
E3_UbLigase_RBR
UEV
IBR_1
NID
IBR
RRM_PARP14_3
RRM_PARP14_1
zf-RING_2
Motif
Other DBs
NCBI-GeneID:
109920465
NCBI-ProteinID:
XP_048452097
LinkDB
All DBs
Position
4:77752459..77809947
Genome browser
AA seq
810 aa
AA seq
DB search
MLQFYQTDSCCGNGAKNELVNLNGSIPVPCGGKIYSVPISIWLHNEHPQIPPKCFVKQLP
NLCQNPGIHMDNTGLVSSSYLHNWRYPTSHLVGLIEDIRKSLTSCLNNPLQIPPSQEQQF
STSLVMPPWPSTVPSIGNNCPRLKNIPQPLNSGYFQPPYSNIWSYGHQYKGGAYPVSPAG
ISPSSPSSRPLHETVERKSDKALKKKMDSAEQTAELFEDLHLDKVLNTFNWAVSSKNKQD
VADGTFSSDRIESENAKPLSLHDTQNSRSIDERRVHVLNIPVEFPMHRMKDKLTIFFQRA
INGGGEIVKSQYPTKIPGSAVITFCDAKVAERVVRQEHRLITINNKNFPIRVKLYDEKDG
VLGKDIIGNKIPPVDMVESSSIPVDLPREKSEIFQRLMSLQDNNFTAEDVVEAVQSGLNF
ESALRYLSHECPICGDQVTFSKIVTMTYCNCSFCQDCFRKYFSSVIKEKSIVSMVCPMCS
TPDLKSSRLQEDATEYFNFLDIQIRYYLDEGLHELFQRKLRDRTLIEMPNFRWCAHCSFG
LLHEVDRLRMDCPSCKKSTCFQCKIPWEEQHEGISCEKFKLWKQQNNPEYQASKLDGYLT
KNGIECPNCRVRFDLSRGGCVHFGCTECHYQFCGGCQRPFKLGSACGFMSNCHTKGLHAH
HPRDCFYHLRDWNVERLQQLLNTAGISLTAIVTDNSLEQMKGKCKVIEQRDTSQGLKDEQ
CGHPSVKGYLGFCKIHFIQALVELINKNSLDPVVLYSKEEMLIELQRWGVAIPNQHVTEQ
EEYFTQRLRVKILNELKLDRRQNVSDKNTG
NT seq
2433 nt
NT seq
+upstream
nt +downstream
nt
atgcttcagttttaccagactgattcctgttgtggaaatggagctaaaaatgagcttgtt
aatttgaatggcagtattcctgtgccatgcggaggcaaaatttatagtgttcccattagc
atctggttgcataacgaacatccccagatcccaccaaaatgttttgtgaagcagctacca
aatctctgtcaaaatcctggaatccatatggataacactggcctggtgtcttcaagttac
ttacacaactggagatatccaacatcacatttggtcggtctcattgaagacataagaaaa
tctttaacgagttgcttaaataatccactgcagattcctccttcacaagaacagcaattt
tccacctctcttgttatgcctccttggccaagcactgtaccttccattgggaataattgt
ccacgtctcaagaatattcctcagcctttgaattcaggttatttccagcctccatattca
aatatatggtcctatggtcaccaatataaaggcggtgcttatccagtttcacctgcagga
atttctccaagttcgccatcttccagacctttgcatgaaactgttgagagaaaatctgat
aaagcattgaagaagaaaatggattctgcagaacaaactgcagagctttttgaagacttg
catttggacaaagtactgaatacatttaactgggcagtatcttctaaaaacaaacaagat
gtggctgatggtaccttttcttctgaccggattgaatcagaaaatgcaaaacctttgagt
ttacacgacactcaaaattcaagatctatcgatgaacggagagtgcatgtacttaacatt
cctgttgagtttccaatgcacaggatgaaagataagcttaccatattttttcagcgcgct
atcaacggtggtggagaaatagtcaaatctcagtatcctactaaaattccaggatctgct
gttattacattttgtgatgccaaagttgcagaaagagttgtcagacaggaacatcgctta
atcaccattaataataaaaatttccccatacgagtgaaattgtacgatgagaaagatggt
gtgttgggtaaagatatcattggaaataaaattccccctgtggatatggtagagtcatca
tcaattcctgttgatctgccaagagaaaaatcagaaattttccagagattaatgagcctt
caggacaataatttcacagctgaggatgtggtggaagctgtgcagtctggtttaaatttt
gaatcagctttgcggtatctttctcatgagtgtcctatttgtggagaccaagtaactttt
agcaagattgtgacaatgacgtactgtaactgttcgttctgtcaagactgttttaggaaa
tatttttcatcagttataaaagagaaaagtatagttagcatggtttgtccaatgtgcagt
acaccagatctgaaaagttcccgtctccaagaagatgccacagaatacttcaacttcttg
gatattcagattcgctattatcttgatgaaggacttcatgagttgttccaaagaaagctt
cgagaccgaactttgatagaaatgccaaacttcagatggtgtgcacactgttcctttgga
ctgttgcatgaagtagaccgactgagaatggattgcccttcttgcaagaaaagcacatgc
ttccaatgcaaaattccatgggaggaacagcatgagggaatcagctgtgaaaagtttaaa
ttatggaagcagcaaaacaaccctgagtatcaggcaagcaaactggatggctacctcacc
aaaaatggaatagagtgccctaattgcagagttcgatttgacttgtcgagaggaggttgt
gttcattttggatgcacagaatgccattatcaattctgtggtggctgtcagagacccttt
aaattaggatcggcttgtggattcatgagtaactgccacactaagggtttgcatgcacat
catccccgggactgtttctatcacctcagagactggaatgtggaacggctgcagcagcta
ttgaatacagcaggtatttccttgactgccattgtaactgataacagtctagaacagatg
aaaggtaaatgtaaagtcatagagcaaagagacacttcacaaggtctgaaagatgaacag
tgtggacacccttcagttaaaggttacttgggcttctgcaaaatccattttatacaggct
ttggtggaactcattaataaaaattctttggacccagttgtactatacagcaaggaggaa
atgttaatcgaactacaacgctggggtgtagctatccctaaccaacatgtgactgaacaa
gaagaatactttacacaaagactaagagttaaaatattgaatgaactaaagctggacagg
cgacaaaatgtttctgataagaacacaggatga
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