Rhincodon typus (whale shark): 109920528
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Entry
109920528 CDS
T06055
Name
(RefSeq) piezo-type mechanosensitive ion channel component 2-like
KO
K22128
piezo-type mechanosensitive ion channel component 1/2
Organism
rtp
Rhincodon typus (whale shark)
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rtp04131
]
109920528
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
rtp04040
]
109920528
Membrane trafficking [BR:
rtp04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
109920528
Ion channels [BR:
rtp04040
]
Other channels
Mechanosensitive channel (Piezo)
109920528
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piezo_TM1-24
Piezo_TM25-28
Piezo_cap
Piezo_THU9_anchor
THU_Piezo1
FAM210A-B_dom
Motif
Other DBs
NCBI-GeneID:
109920528
NCBI-ProteinID:
XP_048452150
LinkDB
All DBs
Position
4:complement(108426989..109123931)
Genome browser
AA seq
2775 aa
AA seq
DB search
MASEVVCGLIFRLLLPICLVAACLFRYNGLSFVYLIFLLLIPLFSEPTKKTMQGHTGRLL
KTLCFTSLTFLLLHALFQITIYSLQANEKIKPGFNCTDWEKSFRQIGFESVNGADAGNII
RLFAPDVGMFVAGLATWLVCKSLVQQPPSMDMAQYNPEFQNEEQTGLGAFHYSPDSVCVR
GIILECCTFDVTCRTCVETAKSQIITDTNKLMRNKGDWLDSLFLTSLPPAQLVLSWASLQ
PNQVEEKLDLADPFIYEEDFEVADVVEELEEEGTKQNILRRIATYASKLKEFIGNIIATT
GKVVVTILLGLTGITLPSLSSGVYFFVFLGLCTWWSCGKQFDPLMFSCLCVLMAIFSAGH
LIGLYLYQLQFLQELIPPGDFYARLFGVSPVIQTNCTTTWKIIANPNMSWPQHVNPIMLL
LLYYTLATLIRLWLQEPVIRNMEEESYNREEEEQKEPFESDSSVTANMRRNMWYSAHYAT
DERRALLVTVNGNPVDYHNMHSAFQAENGPTTLEMYSTPQYKWEMVDESPDKTEDDRIPE
ETVNSRLNSLITIFRFIMKQSYICALIAMMAWSITYHSWLTFVLLIWSCILWMVRNRRRY
AMLTSPFMVFYGNVLLTLQYIWSLDLTEEELPQLTGVLQKMKTTPCVELSSKILCALTFW
LLLRQYITERREAKKLKESALSEVKVEELDDGQQGKEIMKVLGTLVMGMFVKYWIYVCGG
MFFFVSFEGKIVMYKIIYMMLFLFCVALYQVHYDWWRRILKYFWIIVVSYTMLVLILVYT
YQFKSFPDLWQNMTGMDIEKLKDLGLEQFSVADLFTSIFIPTSFLLVCILHLHYFHDRFL
ELTDLKAVTSKQESSIYRLVNQDGSLPDIGMMNLNTSAQKEERVEAKQPNEGEEDDDDDE
EEDEDCTEERNNKWHLVIDRLTVLFLKFMETFHKLQVMAWWILELHIIKIVSFYIIWITL
KEVSLLNYVFLISWAFALPYVKLRPLASSVCTVMTCIIIVCKMLYQLSSVQPSNHSSNCT
IPQLNETNVESIEKLKKSVLYASPVDPANWIGLRKSSPLLVYLKNNLLILAVLAFEVTIY
RHQEYFRLRNNLPHPVTKTIFHDITRQHLDNGLVNCAKYFINYFFYKFGLEICFLMTVNV
IGQRMDVYAMLHAFWLFALLYRRRRKAIAEIWPKYCCFLACILTFQYLLCIGIPPAACKE
YPWRYASAKINSNFIKWLYFPDFITNPNPMFLIYDFMMLLCASLQWQVFEDENRAAVRIV
AGDNVEICRDLDAATFSQHNPVPDFIHCRSYLDMIKVIGFSYLFWFVLTIIFITGTTRIS
IFCMGYLVACFYFLLFGGELLLKPIKIILQYWDCLIAYNVFVITMKNILSIGACAYINSL
ILKSCWLIQTFGLVCTVKGYDQPPAENLKKCPLPKDEAGIIWDSICFSFLLLQRRVFMSY
YFLHVVADIKSAQILASRGAELFQATIVKAVKARLEEEKKSMDQLKRQMDRIKTRQQKYK
KGKERMLSLNQSADAQGPQLKPEDDDDDDDEGEPEKDKAKGKKKQWWRPWVDHASMVRSG
DYYLFETDSEEENEEEVKEDEEEQPKKSGFQRAVRKFASAIIALPKSILKLPKTILQLIV
RAIKFIYQTWMKDSKSVLKGKEKNKRKEWENSKKETGGHIAIECEETEELPTPEEVHKHS
NAPDNVFKRVFNLLKFTWVLFLALVDSFTKWLNSISKECIDISTVLRIERCMLTREVKKH
AASNSHNCRYKLMEGNCYLGKAFCPGCSNDLVMGKQNEAICYTEATMLYSRQSTLDDIDD
IPKTSERARPRLRKIEPTQCTMLYSRQGTTDTIEEVEDEQDEEMTIPVCTSDIMTEEVPP
SYSKAVSLDRLSFSSDSAGEKHLMALTPDSRMDLLEDTIFPNLSHELTASELLLNKMFYD
EELEESEKFYKAQPRALLLFFALYNTLVARSEMLCFFVIILNHMVSASMITLVLPILIFL
WAMLSVPRPSKRFWMTAIVYTEVTIVIKYFFQFGFFPWNENLSITREKPDFPPNIIGIEK
KEGYVHYDLIQLLALFFHRSILKCHGLWDEDEKNENASAKDDMEQDHLNESQRKNSIGSL
KSINLQASMDSIHVHFPEQTTARRPSSTGSQISNRSSHRSQRGSISTRNSSSRKGSGSLS
VQPKNKKELLLEKVREQMIKAKTIVIAKTLQIYIPIKHFFYNIIHPEYSAVTDVYVLMFL
ADVVDFIVIVFGFGAFGKHSAAADITSSLSEDQVPEAFLVMLIIQFGTMVVDRALYLRKT
VLGKVIFQVILVFGIHFWMFFILPRVTERRFNQNKVAQVWYFVKCVYFGLSAYQIRCGYP
TRVLGNFLTKSYNYINLFLFQGFRLVPFLTELRAVMDWVWTDTTLSLSSWICIEDIYAHI
FILKCWRESEKRYPQPRGQKKKKVVKYGMGGLIVFLLICIVWFPLLFMSLIKSVAGVTNK
PLDVSISITIGGYQPIFTMSAQQKQLQDFDQSQYNKLLNNFKDNPAAMQFLDAYMKEDIL
IAQLEGNSNSLWTISPPSRKKMIEELKDNVSKVFIVVSWSVQRNISLGGKSEIASDKISL
EIQPEAKIALAAAVEGKNKSVKIENIFPNYIRAPSDSESKPVKQLYENDADYCELIVKLV
QQGNCSSDHCQEWWTVNQSERFYRNDDKESLEIIVFSDKVSPPSLGFLAGYGIMGLYASV
VLVIGKFVREFFSGISHDIMFEELPNVDRILKLCTDIFLVRETGELELEEDLYAKLIFLY
RSPETMIKWTREKTK
NT seq
8328 nt
NT seq
+upstream
nt +downstream
nt
atggcatcggaagtggtgtgtgggttgatcttcagattgcttcttcccatctgtttagtt
gctgcatgtttgtttcgatacaatgggctatcgtttgtgtacctcatttttctcctcctt
attccacttttttctgaacccacaaaaaagacaatgcaaggacatacaggccgcttactg
aaaaccttgtgttttacaagcctcacatttctcctactgcatgccttgtttcaaattaca
atttacagcctccaagctaatgaaaaaatcaaaccaggcttcaattgcacagattgggaa
aagagcttccgacagataggatttgaaagtgtgaatggggcagatgctggaaatattatt
agactttttgctccagatgttgggatgtttgttgctggcttggctacatggcttgtctgt
aaaagtttagttcaacagccaccatcaatggatatggcacagtacaatccagagttccaa
aatgaagagcagactggtctgggtgctttccactatagtccggacagtgtgtgtgtacgt
ggtatcatcctggagtgctgcacatttgacgtcacttgcagaacatgtgtagaaacagca
aaaagtcaaataattactgacacaaataaattgatgagaaataagggtgattggctggac
agcttgttcttaacaagtttacctccagctcagcttgttcttagctgggcttccctccaa
ccgaaccaggttgaagaaaaacttgacctggcagatccattcatttatgaggaagatttt
gaggtagcagatgtagttgaagaattggaagaagagggaaccaaacaaaatattcttcgc
agaattgcaacatacgcatcaaaactaaaagaatttattggaaatattatagctaccact
ggaaaagtagttgttactattttacttggtctaacaggcattacactaccatctttgagc
tcaggagtatacttcttcgtatttttgggattgtgtacttggtggtcctgcggtaaacag
tttgatccactgatgttcagctgtttgtgtgtattaatggccatattcagtgcaggacac
ttgattggactgtatctttaccagttgcagttcctgcaggaactcattccacctggtgac
ttctatgcaaggttgtttggtgtatcaccagttattcaaacaaattgcacgactacctgg
aagatcatagccaatcccaatatgtcttggccccaacatgtcaatcctatcatgctgtta
ttactgtactacactttggctacactcatacgtctctggcttcaagagccagttataagg
aatatggaagaagaaagttacaacagagaagaagaagagcaaaaagagccatttgaaagt
gattcatctgttactgccaatatgcgacgtaatatgtggtattcggcacactatgcaact
gatgagagaagggctttgcttgtaacagtaaatggaaaccctgtagactatcataatatg
cattctgcatttcaagctgagaatggtccaaccacactagagatgtactccacaccacaa
tataaatgggagatggttgacgaatccccagacaaaactgaagatgacagaatccccgag
gagacagtgaatagcagactcaacagcctcatcaccattttccgtttcattatgaagcag
agctatatatgtgcactcattgccatgatggcttggagtattacctatcatagctggctc
acctttgtcttattgatctggtcctgtattctctggatggtgcgaaatcggcggcgatat
gccatgctcacatctccattcatggtcttctatggaaatgttctcttaaccctgcaatat
atctggagtcttgaccttacagaagaagaacttcctcagttaacaggagtcttacaaaag
atgaagacaaccccatgtgtcgaactaagttcaaagatcctgtgtgcactgacattctgg
ctgctactccgccaatatattacagagcgccgagaagcaaagaaactcaaggaatctgcc
ttatcagaagttaaagtagaggaattagatgatggccaacaaggaaaggagataatgaaa
gtcttaggaaccctggtgatgggaatgtttgtcaagtattggatttacgtttgtggtgga
atgtttttcttcgtcagttttgaggggaagattgtcatgtacaagattatatacatgatg
ttgtttctgttctgcgttgctctatatcaggtgcattatgattggtggcggcggattctg
aaatatttttggattatcgttgtttcctatactatgctggtcttgatcctcgtgtacacc
tatcagtttaagtcattcccagatctatggcaaaatatgacaggaatggatattgaaaag
ttgaaggatcttggattagaacaattctctgttgcagatctatttaccagcatttttatc
ccaacatctttcttgctggtctgtatactacatcttcattatttccatgatcgttttctt
gagctcactgatctaaaagcggttaccagcaaacaggaaagcagcatatacaggttagta
aatcaggatggaagtctcccagacattggtatgatgaatcttaataccagtgctcaaaaa
gaggaaagagtggaggctaaacagccaaatgagggtgaagaagatgatgatgatgatgaa
gaagaagatgaagactgcacagaggaaagaaataataaatggcaccttgtaattgatcga
ctaacagtgttgtttctgaaatttatggagactttccacaaactgcaagttatggcttgg
tggatcttagagctacacataatcaaaattgtatccttttacatcatttggattaccttg
aaagaggtttccttgttgaattacgttttcttaatttcatgggcctttgctttgccttat
gtcaagctacgtccactggcatcaagtgtctgcacagtcatgacttgtataatcattgtg
tgtaagatgttgtaccaactatcttctgttcagccttccaaccactcttctaactgtaca
attccacaactcaatgaaacaaatgtagagagcattgagaaattgaagaaatcagtgctt
tatgccagcccagttgacccagcaaattggattggactaagaaagtcctctccccttctg
gtatatcttaagaacaacctgctgattcttgctgttttagcatttgaagtgacaatctac
cgtcatcaagagtactttaggctccgcaataaccttccacatccagtaacaaaaacaatc
tttcatgacatcacaaggcaacacttggataatggactggtgaactgtgccaagtatttc
ataaattacttcttctacaagtttgggctagagatatgtttcttaatgactgtcaatgtg
attggccaacggatggatgtgtatgccatgcttcatgctttttggttatttgcattactc
taccgacgccgcagaaaagccattgcagaaatatggcctaaatactgttgcttcctagca
tgcattttgacctttcagtacctactttgtattggcatcccacctgctgcgtgtaaagag
tatccatggagatatgccagtgccaaaatcaactcaaactttattaagtggttgtacttt
ccagacttcatcacaaatccaaatccgatgtttctcatttatgacttcatgatgttgctc
tgtgcatcactgcagtggcaggtgtttgaagatgaaaacagagctgcagtaaggatagtt
gctggggacaatgtagaaatttgcagagatttggatgcagccacattcagtcaacataat
ccagtgccggacttcattcattgcagatcctacctggatatgataaaagtaattggattc
agttacctattttggttcgtgctcacaatcatctttatcacaggaacaacacgaatcagt
atcttctgcatgggttaccttgtcgcctgtttttatttcctgctctttggtggagagcta
ttactaaaacctattaaaataatcctccaatattgggactgtcttattgcctacaatgtt
tttgtgatcacaatgaagaatattctctctataggagcctgtgcctacatcaattcttta
attttgaaaagctgttggttaatccaaacatttggtcttgtttgtacagttaagggctat
gaccagccccctgctgagaaccttaagaaatgtccattgcctaaggatgaagcaggcatt
atatgggacagtatatgcttttcttttctgttgctacaaaggagagttttcatgagttat
tacttcttgcatgtagtagcagacataaaatctgctcaaattctcgcatcaagaggtgca
gagctgtttcaagctacaatagtaaaagctgtgaaggctaggctcgaagaggaaaagaag
tcaatggatcagctcaaaagacagatggatcgcatcaaaacaagacaacagaaatataaa
aaaggcaaagagagaatgctcagtttgaatcagtcagcagatgcgcagggtcctcagttg
aagccggaagatgatgatgatgatgacgatgaaggagaaccagagaaagacaaagccaag
ggcaaaaaaaagcagtggtggcggccctgggttgaccatgcttctatggtacgaagtgga
gattactatctctttgagacagacagtgaggaggaaaatgaagaagaagtaaaagaagat
gaagaagaacaacccaaaaagtcaggttttcagagagcagttcggaaatttgcttcagcc
attatagccttgccaaagtctatcctaaaacttccaaaaaccatacttcagttgatagtc
agagctataaagtttatttatcagacctggatgaaagattcaaaatcggtattaaaagga
aaggagaaaaataaacggaaagaatgggaaaacagtaaaaaagaaacaggaggtcacatt
gcaattgaatgtgaagagacagaagaactaccaacaccagaagaagtgcataaacactct
aatgcaccagataatgttttcaagcgggtgtttaatcttctgaagttcacatgggttctt
ttcttggctctggtggacagttttacaaaatggctaaattcaatctcaaaggaatgcatt
gatatatccactgttctgaggatagagagatgtatgcttacgagagaagtaaagaagcat
gctgcttccaattcccacaattgccggtataaattgatggaaggcaactgctatcttggc
aaagccttctgccctggctgcagcaatgaccttgtcatggggaagcaaaatgaagccatc
tgctacactgaagctaccatgctgtactcacggcagtcaactctagatgatatagatgat
attcctaaaacaagtgagcgtgctcgacctaggcttcgtaaaattgaaccaacacaatgc
acaatgctgtattcgcgccaaggtaccacagatacaattgaagaagtggaagatgagcag
gatgaagaaatgacaattcctgtatgcacatcagatatcatgactgaggaagttccacct
tcgtatagcaaagctgttagtcttgatcgcctatcctttagttcagattcagctggtgaa
aaacaccttatggcacttaccccagatagcaggatggatttactagaagatacaatcttt
ccaaatttaagccatgaactaacagccagtgaactgcttcttaacaaaatgttttatgat
gaagagttagaagagtcagaaaaattctacaaagcccagcctcgagcactactcctattc
ttcgctctatataataccttagtagctcgttcggaaatgttatgtttctttgtcattata
ctaaatcacatggtttctgcttcaatgattacgctggtacttcctattctcatcttcctc
tgggctatgttatctgtacccaggccaagcaaacgtttctggatgacagccattgtgtat
actgaggtaacaattgtgatcaagtactttttccaatttggattttttccatggaatgaa
aatttgagtataactcgagaaaaacctgattttcccccaaatataattggcattgagaag
aaggaaggctatgtgcattatgaccttatacagctgcttgcactgttctttcaccgatcc
attttaaagtgtcatggtttatgggatgaggatgaaaagaatgaaaatgcctcagctaaa
gatgacatggaacaagatcatctgaatgagtctcagagaaagaactccataggttcttta
aaatcaattaatttgcaagcatcaatggattccatacatgttcactttccagaacagaca
acagccagaagaccaagttcaacaggttcacagatctcaaatcgatcgtcacatagatca
caaagaggtagtataagcacccgaaacagtagtagccggaaaggaagtgggtcactcagt
gttcaaccaaagaataagaaagagcttttattggaaaaagtaagggaacaaatgatcaag
gcaaaaaccattgtcattgcaaaaacacttcaaatatatattccaatcaaacatttcttc
tacaacattatccatccggagtatagtgcagtaacagatgtctacgtgttgatgttcttg
gctgatgttgtagacttcattgttattgtctttggttttggggcatttgggaaacattca
gcagccgccgacatcacatcttctttgtcagaggatcaagtgccagaggcatttctggtg
atgttaataattcaatttggcacaatggtagtggatcgagcactctatctcagaaagaca
gtcttaggaaaagttatctttcaagtcatccttgtttttggaattcatttctggatgttt
tttatattaccaagagtgacagaaaggaggtttaaccagaacaaagttgcacaggtttgg
tactttgttaaatgtgtttactttggattgtcagcatatcaaatacgttgtggttaccca
acacgtgtgcttggtaactttctgacaaaaagctacaactatataaacttgttcctcttc
caaggatttcgactagttccatttctgactgagctcagagcagtgatggactgggtctgg
acagatacaactcttagtctctccagttggatctgtatagaagacatttatgctcatatt
ttcattctaaagtgctggcgtgaatctgaaaagcgatatcctcagccacgtgggcagaag
aaaaagaaggttgtaaagtatggcatgggtggccttatcgtcttcttgttaatatgcatt
gtgtggttcccactcctcttcatgtccttgatcaaatctgttgctggtgtgacaaataaa
cctttggatgtatccatttcaataacaattggaggttatcagcctatctttacaatgagt
gcccagcagaagcagctacaagattttgatcaaagtcagtacaacaaacttttaaacaat
tttaaagataatcctgctgccatgcagttcctggatgcgtacatgaaagaagacattcta
attgcacaacttgaaggaaactcaaattctctttggaccatcagtccaccaagtcggaag
aagatgatagaagaattaaaggataatgtttcaaaagtcttcattgtggtttcttggtct
gttcaaaggaatatcagtcttggtggaaaatcagaaattgcttcagataaaatttcttta
gaaattcaacctgaagccaaaatagctcttgctgcggcagtggaaggaaagaacaagtct
gtaaaaattgaaaatatatttccaaactacattagggctcccagtgattctgaatcaaaa
cctgtgaaacaactttatgaaaatgatgctgactactgtgaactcattgtaaaactggtt
cagcaaggaaactgctcttcagaccactgtcaggaatggtggactgttaatcagtctgaa
agattctacagaaatgatgataaagaaagccttgaaattattgtattcagtgataaagtt
agcccacctagccttggatttcttgctggttatggcatcatgggtctgtatgcatcagtt
gtgctggttattgggaagtttgtacgtgagtttttcagtgggatctctcacgacatcatg
ttcgaagagctgccaaatgtggatcgaattttgaaattatgtacagatatcttcctggtt
cgagagactggagaactggaattagaggaggatctgtatgccaagctcatcttcttgtac
agatcaccagaaactatgatcaaatggacacgtgaaaagacaaaatga
DBGET
integrated database retrieval system
