Rhincodon typus (whale shark): 109920533
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Entry
109920533 CDS
T06055
Symbol
vegfc
Name
(RefSeq) vascular endothelial growth factor C
KO
K05449
vascular endothelial growth factor C/D
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp04010
MAPK signaling pathway
rtp04020
Calcium signaling pathway
rtp04510
Focal adhesion
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
109920533 (vegfc)
04020 Calcium signaling pathway
109920533 (vegfc)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
109920533 (vegfc)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
rtp04052
]
109920533 (vegfc)
Cytokines and neuropeptides [BR:
rtp04052
]
Cytokines
Growth factors (RTK binding)
109920533 (vegfc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDGF
CXCXC
Motif
Other DBs
NCBI-GeneID:
109920533
NCBI-ProteinID:
XP_048449985
LinkDB
All DBs
Position
3:112749644..112867920
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AA seq
348 aa
AA seq
DB search
METGHMSSELEHQLRSVSSVDELMTIFYPEHWKMLKCQLMKGRPLYRETGFGTVTEEPVT
FAATYYNPEILKSIDTEWKRTQCMPREVSLDVGKEFGSATNIIFKPSCVSVYRCGGCCNS
EGITCMNTSTSYVSKTLFEITVPISQGPKPITISVANHTGCRCMSKLDFFRQVHSIIRRS
ISTSQSDCLMPNKTCPKNHIWNSFLCRCVRQQDFSSFLLPKSDSGGDSSYYSVCGPNKEL
DEETCQCVCKGGQHHSSCGRHKMLDKDSCQCVCRNGLYPALCGPHKQFDMDSCECVCKKS
CPRNQPLNPVKCACECTESPNKCFLKGTRFHPHTCRSVLFLFTVTVPD
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atggagactggtcatatgagcagtgaactggaacatcagttgcggtctgtatccagtgtg
gacgaactcatgacgatattttacccagagcactggaaaatgttgaaatgtcagttgatg
aaaggccgaccactctacagagaaactggcttcggaacagtcacggaggaacccgtgaca
tttgcagcaacatattataaccctgagattctaaaaagtattgatactgagtggaaaagg
actcagtgcatgcccagggaggtgtccttggatgtggggaaagaatttgggtcagcaaca
aacatcatctttaaaccgtcctgcgtgtctgtctacagatgtggcggttgctgcaacagc
gagggaataacatgcatgaacaccagcacttcttatgtcagcaagacactgtttgagatt
acagtgccgatttcccagggaccaaaacccataactatcagtgttgcaaaccacacaggc
tgcagatgtatgtcaaaactcgatttcttcagacaggttcactccatcatcagacgttcc
atatctacatcccaatcagactgtctgatgccaaacaaaacttgtcccaagaatcacatc
tggaatagttttttatgcagatgcgtgaggcaacaagatttcagcagctttctgctcccc
aaaagtgactcaggtggtgacagcagctactacagtgtctgtgggcctaataaagaactg
gatgaggagacctgtcagtgcgtctgtaaaggagggcaacaccattccagctgtggacgt
cacaagatgctggataaggattcatgccagtgtgtgtgcagaaatggactatatcctgcc
ctgtgtggtccccacaagcagtttgacatggattcctgcgagtgtgtttgcaaaaagagt
tgtccaagaaatcagcctttaaacccagtaaaatgtgcctgcgaatgtacagagtctcca
aataaatgctttctgaaagggacgaggtttcaccctcacacttgcaggtcagtgttgttt
ctgtttactgtcactgttccagactga
DBGET
integrated database retrieval system
