Rhincodon typus (whale shark): 109920536
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Entry
109920536 CDS
T06055
Symbol
dcn
Name
(RefSeq) decorin
KO
K04660
decorin
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp04350
TGF-beta signaling pathway
rtp04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
109920536 (dcn)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
109920536 (dcn)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
rtp00535
]
109920536 (dcn)
Proteoglycans [BR:
rtp00535
]
Extracellular matrix (ECM) proteoglycans
Small leucine-rich proteoglycan (SLRP) family
class I
109920536 (dcn)
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GFIT
Motif
Pfam:
LRR_8
LRR_4
LRRNT
LRR_5
LRR_14
LRR_9
LRR_LRWD1
Motif
Other DBs
NCBI-GeneID:
109920536
NCBI-ProteinID:
XP_048463587
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All DBs
Position
18:46142457..46208215
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AA seq
350 aa
AA seq
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MRVFISLAFLIAASWAKPFRQAQFLDFMMEDEGSGLFPDNEMPVCPFGCQCHLRVVQCSD
LGLTTVPKDIPKDTTLLDLQNNKITEIKENDFKNLRNLNALILVNNKIGTVHPKAFAPLV
KLQRLYLSKNLLKEIPANIPSSLHELRIHENEITKVKKNAFDNLSQVYALEMGSNPLKNS
GIDSGAFNGLKKLSFIRLSDASLTDIPKGLPVSLAEIHLDGNKISRVKADSLKGLKNLVR
LGLSFNEINSVDNGSLDNTPYLRELHMDNNSLRKVPAGLADHRFIQVVYLHNNLIAAVGV
NDFCGLDYYAKKNLYSGISLFNNPVPYWEIQPVTFRCATNRAAIQLGNFK
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgtgttcatctcgctggcattcctgatagcagcctcctgggctaagccatttcgt
caggcacagttccttgactttatgatggaggatgaaggatctggtttattccccgataat
gaaatgcccgtgtgcccctttgggtgccagtgccacctccgagtggtgcagtgttctgac
ttaggtctaaccacagtgcccaaggacattcccaaagatactacactgcttgatctgcag
aacaacaagatcacagagataaaagaaaatgacttcaagaatctaagaaaccttaatgcc
ttgatcctggtgaacaacaaaatcggtacagtgcatcccaaggccttcgcacccctggtg
aagttgcagagactttacttgtccaagaacctgctgaaagaaatcccagctaacatacct
tcatcactgcatgaacttcgcatccatgagaatgaaatcaccaaagtgaagaagaatgca
tttgacaatctgtcacaggtgtacgccctagaaatgggcagcaaccctttgaaaaattca
ggtattgacagcggtgcctttaatggattgaaaaagctttctttcattcgactgtcagat
gcctcactcacagacattcctaaaggtctcccagtatcgttggctgaaattcatctcgat
ggcaacaaaatcagtcgggtcaaagctgattcgctgaagggtctgaagaatctggtcaga
ctgggcttgagtttcaatgagattaacagtgtggataatggctcattggacaacacaccg
tacctgagggaacttcacatggacaacaactcactccgaaaagtgccggccggcttggct
gaccatcggttcatccaggtggtttatctccataacaacttgatcgcggcagtgggtgtg
aatgacttctgcgggcttgattactacgccaagaagaacctgtactcggggattagtctc
ttcaataaccccgtcccatactgggagatccagccagtcactttccgctgtgccacaaac
cgtgcagccattcagctcggcaactttaagtaa
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