Rhincodon typus (whale shark): 109920587
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Entry
109920587 CDS
T06055
Symbol
snf8
Name
(RefSeq) vacuolar-sorting protein SNF8 isoform X1
KO
K12188
ESCRT-II complex subunit VPS22
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
109920587 (snf8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rtp04131
]
109920587 (snf8)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rtp04147
]
109920587 (snf8)
Membrane trafficking [BR:
rtp04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-II complex
109920587 (snf8)
Exosome [BR:
rtp04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
109920587 (snf8)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EAP30
DnaD_N
MarR
TFIIE_alpha
TrmB
Sigma70_r1_1
DUF4896
Motif
Other DBs
NCBI-GeneID:
109920587
NCBI-ProteinID:
XP_020376212
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All DBs
Position
30:34402327..34411297
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AA seq
258 aa
AA seq
DB search
MHRRGVGAGAIARKKLAEAKYKERGTVMAEDQLVQMSKQLEMFKTHLEEFASKHKQEIRK
NSEFRVQFQDMCATIGVDPLASGKGFWSEMLGVGDFYYELGVQIIEVCLALKHRNGGLIT
LDELHQRVLKGRGKFAQDVSQDDLIRAIKKLKSLGSGFSIIPMGGGYLVQSVPAELNMDH
TVVLQIAEKNGYVTVSEIKSSLKWDSERTNQVLEHLLKEGLAWIDKQAPEEPQYWLPALF
SDLYSQDVTPEEADESLP
NT seq
777 nt
NT seq
+upstream
nt +downstream
nt
atgcaccgcaggggagttggagccggtgccatcgccaggaagaaactcgccgaagccaag
tataaagagcgaggaaccgtgatggctgaggaccagctggttcagatgtcaaagcagctg
gaaatgttcaagacacatctggaggaatttgccagcaagcacaaacaggagattcggaaa
aactcagagtttcgtgttcagtttcaggatatgtgtgcaacaattggagtggaccctctc
gcctctggcaaaggcttctggtcggagatgctgggtgttggtgacttctactacgaactg
ggagtgcagattattgaagtgtgtctggctctgaaacatagaaatggaggtctgatcaca
ttggacgagctgcaccagcgtgtgctgaaaggtcgaggcaagtttgcccaagatgtcagt
caggatgatctcattcgggccatcaagaaactgaaatccttgggtagtggtttcagtata
atcccaatgggaggtggatacctggtgcagtctgtccctgcagagctgaatatggatcac
acggtggtactgcagattgcagagaagaatggatatgtgacagtcagtgaaattaagtcc
agcctgaagtgggattctgaacgcactaatcaagtactggaacatttgttgaaggaaggc
ttggcgtggatagacaaacaagctcctgaagaacctcagtactggttacctgcactcttt
tctgatctatactcccaagatgtcactcctgaagaagctgatgaaagtttgccgtga
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