Rhincodon typus (whale shark): 109920593
Help
Entry
109920593 CDS
T06055
Name
(RefSeq) GRIP and coiled-coil domain-containing protein 2 isoform X1
KO
K20282
GRIP and coiled-coil domain-containing protein 2
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
109920593
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rtp04131
]
109920593
Membrane trafficking [BR:
rtp04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
109920593
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rab_bind
GRIP
GAS
DUF2710
Motif
Other DBs
NCBI-GeneID:
109920593
NCBI-ProteinID:
XP_048453679
LinkDB
All DBs
Position
6:complement(45748814..45808622)
Genome browser
AA seq
1690 aa
AA seq
DB search
MEESGQDGMPSPAAPGTGKSKLDTLPKEELIKFAKKQVMLLQKTKSKCTALENEIEQLRT
KPAVDANDAVIQELTTRLDSVLLEKAEAQQSTLSLRKELEKSKEELKDTLSREIEFQEEM
KSLKNQYLSKIEALNVELEGVQAKHTEEVTRLENELQASNQKHSINIGKLEQQLEIYSVQ
QTEAKRLGEELNAVKIAYEDHISQLKQQLEAGVEKQKEEIRKLQESHKDAVAQKESKMND
LQKELEIMQISHLEEVTTLKQQLESSVKTHEKELQELEQDLTEKLSIKEKSLENEQITNR
TNYECQLNELKEELRKMTEEQTKVPKDIPNEVTAELNEQVKHLENYVKKVELQGSLLHDE
LLYMKNEKGKLELELYHTREEFFHEREDWEFKINELQLSKEEYMNMVAKLTDELQSANDR
CEMAAAQHSYEMQVTTEQNKKDISVLEQTLNAAAEKEKLQSLLEIDNLKVRCQTLLKEKE
ETVGQYENLRKTMEMLQTELGESASKISYEFEVMKQQQSDEIHDLQQKLRKVFNEKDSLL
ETINRLQVEVEEAKELKQTVSNLQEMNQELMSSMQKKEVNLNDLQEQVGTLIGEKGELVT
AMNDCEGSIHSLKQSLAMEEGKCAELEQQIQVLDKDKCELKQRLDEIAHQLLTAVSEKES
TCQQLSEMENRLGAIITEKEHLDTQTKNLEGFIAKLEKEKEALQKEMAMATLQNENLGAN
EEKLQDLSKQLQILTQERDSLQLAEGIEKQKICDVRLAISSILEQEIFSFTNDAPELDIL
EAVQLLKESMTKYREEKQSVTLLCDERVLQLHQQLELQSNANRDQQAEFSSLIDDLQKEK
TLLQKNLDDALFDKEGLQRDLLELQNLSEKITQENEDLLVQIQNVTEKLENMKTEKQEQN
EKTEKETEAKEEQLKCQLNEKESELSKFKEELQKLKELMQKTSNEENILESTIVELNNKM
VALEKVSNDKENRINKIKAVAVKAKKELDASKKQVLQLTEEMEIIKSERDRLSSSVKDIM
QGAESYKNLLLEYEKQGEKLDMEKTRANNSERQVEELTQHLHACLQQHKQLVSEKEDMFA
HLGTLQSNVKQLEAKVLESEKAKNTVEKEFEALKLFKEQVSKENHVLLKDVEELKKQLQN
EKQQLQQTTQELELVRKDAQKTTLMDMEIADYERLVKELNQKITDRDNRIVEVIDEMTSC
KQKLETMDCEIKSLQLALEEYKEKNTKMKQILVKTKKELTDSKRAEGEQLAVQAFIKGEL
EANQQQVENYKIQVAELIAENHKLQEQLRQTNEQNHRTVNAFTQKMAALQEECNVAKAEQ
AATAVDFESYKVRVHNVLKQQKSRSAAQNEHELTQEEKEQLQKVVDQLKAKLQETHCNLQ
VNAGELQALQLEHDLLLERHNKILQETVSKEAEFREKLCCVQSENVLLKSQHAQTVSQMT
AQNEAAQKSFHEQIRNLQEDHKKTVEMLQKQLTKMEAQIFQLQTESSSANSAQLEPSGKI
PRDRRNLDISVIDINSIDRGEGEGMEMTETESVSSSNTQVASLEQLLTSPEAALDVAQWQ
PEPTKEEITQKLNTATKSIDHLNGLLRETEATNAILMEQITLLKNEVRRLERNQEREKSI
ANLEYLKNVMLKFIFLNAGSEKQSLLPVIDTMLQLSPEERSKLSAIAQGEDESTSRSSGW
ASYFHNWSGL
NT seq
5073 nt
NT seq
+upstream
nt +downstream
nt
atggaggagagtggtcaggatggcatgccttcaccagcagctcctggaacaggaaaatct
aagctggacaccttaccaaaggaagagcttataaaatttgcgaagaaacaggttatgctt
ttgcagaagacaaagtcaaaatgcaccgctctggaaaatgaaattgaacagctcagaaca
aaaccagctgttgatgctaatgatgcagtcatccaggaactgacaaccaggctggattca
gtacttttggaaaaagcagaagctcagcaaagtacactttctcttagaaaggagctagaa
aaaagtaaagaagagttgaaggatacactgtcaagagaaatagaattccaggaggagatg
aagtcattaaaaaatcaatatttaagcaaaattgaagctttgaatgtggaattggaaggt
gttcaagctaaacacacagaagaagtaaccaggttggaaaatgaacttcaagcgtcaaat
cagaaacacagtatcaacattggaaaacttgaacagcaacttgagatctactcagttcag
caaactgaagcaaaaagattgggagaagaattaaatgctgttaaaattgcctatgaggat
cacatatcacaattgaaacaacagttagaagctggtgttgagaagcagaaggaagaaatt
agaaagctgcaagaaagtcataaggatgctgttgcacaaaaggaaagtaaaatgaacgac
ctccagaaagagcttgaaattatgcaaatctcccatcttgaggaagtgacaacattgaag
caacagttggaatcttcagttaaaacacacgagaaggaacttcaggaattggaacaagat
ttaacagaaaaactttcaataaaagagaagagtcttgagaatgaacagatcactaatagg
accaactatgaatgtcagttgaatgaactgaaggaagagttaagaaaaatgacagaagag
caaaccaaagtcccaaaagacatccctaatgaagtaactgctgaattaaatgagcaggtg
aagcatcttgagaactatgtgaaaaaggtggaattgcaaggaagtttgttacatgatgaa
cttttgtatatgaaaaatgaaaaaggaaagctagagttagaactatatcacacaagagag
gagttcttccatgagcgagaggactgggaatttaagataaatgaactccagttatccaag
gaagaatatatgaatatggttgcaaagctgacagatgaacttcaatctgctaatgaccgt
tgtgaaatggcagcggcccagcattcctatgaaatgcaagttacgacagaacaaaataaa
aaagatatttcagtactcgagcaaactttaaatgccgctgctgagaaagagaaattgcag
tctcttctcgaaatagataacctgaaggtgcgatgccaaacattattgaaggagaaagaa
gagacagtgggtcagtatgaaaacttgcgtaaaaccatggaaatgttacagactgaatta
ggagaatctgcttcaaagatcagttatgagtttgaagttatgaagcaacaacaatctgat
gaaattcatgacctgcagcagaaactccgaaaagtttttaatgaaaaagactctcttctg
gaaaccatcaacaggctgcaggttgaagttgaggaggcaaaagaactgaagcaaactgtc
agcaatttacaagagatgaatcaagaattgatgtcatcaatgcagaaaaaggaggtaaac
ttaaatgacttacaagaacaagtgggcactctaatcggagagaaaggggaactggtcaca
gcaatgaatgactgtgaagggtcaatacatagtctgaaacaatctcttgcgatggaggaa
ggtaaatgtgcagaacttgagcagcaaatacaagtacttgataaggacaaatgtgaattg
aagcaaagattggatgaaattgcacatcaattgctaactgcagtttcagagaaggagtct
acttgtcaacaactaagtgaaatggaaaacagactaggagctattataactgagaaagaa
cacttagacactcaaacaaaaaatctggaaggctttattgcaaaattagaaaaagaaaag
gaagctttacaaaaagaaatggcaatggccactttacagaatgaaaatttgggagcaaat
gaagaaaaacttcaagatcttagtaaacagttacaaattctgactcaggaaagagacagt
ctccaactagcagagggaattgaaaaacagaagatttgtgatgttagacttgcaataagt
agtattcttgaacaggaaatcttcagttttacaaatgatgctcctgagttagatatactt
gaggcagtgcaattactgaaggaatcaatgacaaaatacagggaggaaaagcagtctgtg
acgttactgtgcgatgagcgtgtactacaattgcatcaacaattggaattgcaatctaat
gcaaatagagatcaacaagctgagttcagttctttaatagatgaccttcaaaaagagaaa
acccttttgcagaagaatctagatgacgcactgtttgataaggaaggattgcaaagggat
ttgttagagttgcagaacctaagtgaaaaaatcactcaggaaaatgaagatctgcttgtt
cagattcaaaatgttacagagaagcttgagaacatgaagacagaaaagcaagaacagaat
gaaaaaactgaaaaagaaacagaagcaaaagaggaacaattaaagtgccagctgaatgaa
aaagagtctgagctatcaaagtttaaagaggaacttcaaaaattgaaggagttgatgcag
aaaacatccaatgaagagaatattttagaaagcacaatcgtggaactgaataacaaaatg
gttgctctagaaaaagtaagcaatgataaggaaaacagaataaacaagattaaagctgta
gcagtgaaagctaaaaaagaactcgatgccagcaaaaaacaggtgctacagttaacagaa
gagatggagattataaagtctgaacgagacagattgtcttcttctgtgaaagacattatg
caaggtgcagaaagctacaagaaccttttgctagagtatgagaaacaaggagaaaaacta
gatatggaaaagacgcgagcaaataactctgaacgtcaggtggaggagcttacacaacac
ttgcatgcttgtcttcaacagcacaaacaattggtttcagagaaggaagatatgtttgct
catttgggaactctgcagtcaaatgtaaaacagctggaagcaaaagttttagaatctgag
aaagccaagaatactgttgaaaaggagtttgaggccttaaaacttttcaaggagcaggtt
tccaaggagaatcatgtactgttgaaagacgttgaagaacttaaaaaacaacttcaaaat
gagaaacaacagctacaacagacaacacaggaactggaacttgtaagaaaggatgctcaa
aaaaccacgctgatggacatggagattgcagactatgaacgtcttgtgaaagaactgaac
cagaaaattactgatcgggacaaccggattgtagaagtgatagacgaaatgacatcatgc
aagcagaaactagaaacaatggattgtgaaatcaaatctcttcagttagcgttggaagag
tacaaagagaaaaataccaagatgaaacaaatcctagtgaaaactaagaaggaacttaca
gattcaaagagagctgaaggagagcaattagctgtccaagcttttattaagggagaactc
gaagcaaaccagcagcaagtggaaaattacaagattcaagtggcagagttaatcgctgaa
aaccacaagcttcaggaacaattgcgccagacaaatgagcagaatcatcggacagtgaat
gcatttacacagaagatggcagctcttcaggaggagtgtaatgttgcaaaggctgaacag
gctgcaactgctgtggattttgaaagttacaaagttcgtgtacataatgtcctaaaacaa
caaaagagccgatcagctgctcagaatgaacatgagttgacccaggaagaaaaagaacaa
cttcaaaaggtggttgatcagctgaaggccaagttacaggaaactcattgcaatttacaa
gtcaatgcgggtgagttacaggctctacagttggagcatgacctgctgctggaaaggcat
aacaagattctccaagaaactgtgtccaaggaggctgagtttcgagaaaaactttgttgt
gtacagtctgaaaatgtcttgctgaaatcacagcatgctcagactgtcagccagatgact
gcccagaatgaagcagcacaaaaaagcttccatgagcaaatccggaacctgcaagaagat
cacaaaaagactgttgaaatgttacagaaacaattaactaaaatggaggcgcagatcttc
cagcttcaaactgaaagcagttctgcaaactctgcacaacttgagccatctgggaagatt
ccacgtgaccgaagaaacttggacatatctgtgatagatatcaattccattgaccgtgga
gaaggagaaggaatggagatgactgaaacagaatcggtatcttcttccaatacccaagtt
gcctctcttgagcaattacttacctccccggaggcagcattagatgttgcacaatggcag
ccagagccaaccaaagaagaaataacacagaaattaaatacagctacaaagagtattgac
catttaaatgggctcttgcgtgagactgaagctactaatgccatccttatggaacaaatc
acactgctgaagaatgaagtgagaagactagagagaaaccaggaacgtgaaaagtctatt
gcaaacctggagtatttgaagaatgttatgttgaagttcatattcctaaatgcaggtagt
gagaagcaaagccttctcccagtaattgatacaatgttacaactgagcccagaggagcga
agcaagctgtctgctatagctcaaggagaagacgaaagcacttcacggtcatcaggttgg
gcttcgtattttcacaactggtctggactgtga
DBGET
integrated database retrieval system
