Rhincodon typus (whale shark): 109920596
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Entry
109920596 CDS
T06055
Name
(RefSeq) zinc finger protein 271-like
KO
K09191
general transcription factor IIIA
Organism
rtp
Rhincodon typus (whale shark)
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rtp03000
]
109920596
03021 Transcription machinery [BR:
rtp03021
]
109920596
Transcription factors [BR:
rtp03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
109920596
Transcription machinery [BR:
rtp03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIA
109920596
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2H2_jaz
zf-met
BolA
zf-C2H2_16
C2CH-3rd_BIRD-IDD
GAGA
zf-C2H2_6
zf-C2H2_15
Zf-C2H2_ZNF451
B129_C2H2-zf
zf-C2HC_2
zf-C2H2_ZN142
zf-C2H2_DHX34
DUF4764
Motif
Other DBs
NCBI-GeneID:
109920596
NCBI-ProteinID:
XP_048472776
LinkDB
All DBs
Position
35:3190587..3201742
Genome browser
AA seq
343 aa
AA seq
DB search
MEEKPFKCEICSKAFMTSTILLRHQSIHTGEKPFTCEVCDKAFSQLGNLLRHQRIHRGEK
LFSCEVCNQSFFDSSNLQAHQRIHTGERPFTCEVCDVSFSQSSTLRRHQRIHTGERPFVC
KVCDKSFLQSSNLHRHQYSHTGEKPFKCEVCEKTFLTSTTLLRHQRIHTGEKPFRCDLCE
AAFYRSSNLLSHQKIHTGEKPFVCEVCDKSFLSSSHLRTHLYLHTGEKPFVCDECDRSFL
ESSTLRRHKRIHTGEKPFTCEMCNKSFSQLGNLYTHQRIHTGEKPFTCEVCDKSFLGSSA
LRRHQIIHTGEKAFKCEVCSKSFSQSSTLRRHQRIHTGETTHV
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atggaagagaaaccgttcaagtgtgagatttgtagtaaagcttttatgacttctacaatt
cttctgagacaccagagcattcacactggggagaaaccattcacatgcgaggtatgtgac
aaagcattctcacagttagggaacctgctcagacaccaacggattcacagaggtgagaaa
ctgttcagctgtgaagtgtgcaaccaatcattttttgattcttcgaaccttcaagcacac
caacgcattcacacaggggagagaccattcacatgtgaggtctgtgacgtatcattctca
cagtcatcaaccctccgcagacaccaacggattcatactggagagagaccattcgtgtgc
aaggtatgtgacaaatcattcttacagtcatcaaatctccacagacaccaatacagtcat
acaggggagaaaccattcaagtgtgaggtgtgcgagaaaacctttctgacatctacgaca
ctcctgagacaccagaggattcacacaggggagaagcccttcaggtgtgatttgtgtgag
gcagctttctaccgatcatccaatctcctgtcacaccagaagattcacacaggggaaaag
ccatttgtatgcgaggtgtgtgacaaatcattcttgtcatcgtcacacctccgcacacat
ctgtaccttcacactggagaaaaaccatttgtgtgtgatgagtgtgacagatcatttctg
gaatcatcaaccctccgcagacacaaacgcattcacacgggggagaaaccattcacatgt
gagatgtgtaacaaatccttctcacagttaggaaatctctacacacatcaacgcattcac
acaggtgagaaaccattcacgtgcgaagtgtgtgacaaatcctttttgggatcatcagcc
ctccgcagacaccaaattattcacacaggggagaaagcatttaagtgtgaggtctgcagc
aaatcattctcacagtcatcaactctccgcagacaccagcgcattcacacaggagaaact
actcatgtgtga
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integrated database retrieval system
