Rhincodon typus (whale shark): 109920654
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Entry
109920654 CDS
T06055
Symbol
lgi3
Name
(RefSeq) leucine-rich repeat LGI family member 3
KO
K19999
leucine-rich repeat LGI family member 3
Organism
rtp
Rhincodon typus (whale shark)
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rtp04131
]
109920654 (lgi3)
Membrane trafficking [BR:
rtp04131
]
SNARE
SNARE associated proteins
Syntaxin-binding proteins
109920654 (lgi3)
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Ortholog
Paralog
GFIT
Motif
Pfam:
EPTP
LRR_8
LRR_4
LRR_5
LRR_14
LRR_9
Motif
Other DBs
NCBI-GeneID:
109920654
NCBI-ProteinID:
XP_020376294
LinkDB
All DBs
Position
40:complement(1653236..1661263)
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AA seq
447 aa
AA seq
DB search
MIGDDAFNGLSHLQYLFIENNNIQSLSKYTFRGLKSLNHLSLGNNNLLTLPRDIFMDLHV
LTHLDLRGNAFHCDCKVKWLIEWLQVTNTSVPPVHCTSPSKYHNVVVNYLPIRDFDCVRT
EFSVYETLPFQAVSVESFVYADDLFVTFAQANNGNCTFFMWDHVEMVFRTSENISAHAAV
YCKPLVIEGQLYVVLAQLFRGSHIYRWDSYGGTFVKIQDIDTAKIRKPNDIESFVIDGEW
YFVIVDSSKAGSTTVYKWNKVGFYSHHSLHPWHRDTDAEYIETDNKPKLILTSSTQTPVV
YQWNKAQRRFTYLTEIPDMLDVHTVKHFQLQKAVYLCLVRFIGDSKLVRWEGQRFTEIQA
LPSRGSMIAEPFRVAHWQYMVLGSDFSFSHVYLWDAEKRVFSRFEDWSVRAARRFQMVSI
DGMHLVLAPSFKGNTIIYRHMVIDTSA
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgattggagatgatgcgttcaatggtttatctcatctccagtacctattcatagagaac
aacaacatccaatcactctccaaatacacattccgaggcctcaagtctctcaaccatcta
tcactgggaaacaacaatctgctaactcttcccagagacatcttcatggatcttcatgtc
ttgacacatttggatctccgtgggaatgctttccattgtgactgtaaagtgaaatggctg
atagaatggctacaggtgaccaacacgtcagtccctccagtgcactgcaccagcccgagc
aagtatcacaatgtcgtggtcaactatctgccaatcagggactttgactgcgtcaggaca
gaattcagcgtttatgaaaccctgcccttccaggctgtctctgttgagtcctttgtgtat
gctgatgacctctttgtaacatttgcccaggctaataatgggaactgcacgttcttcatg
tgggatcatgttgaaatggtcttcaggacatcggagaacatatctgctcacgccgctgtg
tactgtaagccgctggtgatcgaggggcagctgtatgttgtcttggcgcagttgttccga
ggatcccacatctaccggtgggacagctacgggggcacgtttgtcaagatccaggacatt
gacaccgccaagatccgcaagcccaacgacatcgagagcttcgttattgatggggagtgg
tactttgtgatcgtggacagttcgaaggccggctccaccaccgtttacaagtggaacaaa
gtggggttttactctcaccactccctccacccctggcatcgggacacagacgccgaatac
atcgagacagacaacaagcccaagctgatccttaccagcagcactcaaacgccggtcgtc
taccagtggaacaaggcgcagcggcggttcacctatctcaccgaaatccccgacatgttg
gacgtgcacaccgtgaaacatttccagctccagaaggccgtgtacctctgcctggtccgt
ttcatcggcgactccaagctggtgaggtgggagggccagcgcttcactgagatccaggcc
ctgccctcaaggggctccatgatcgctgagcccttccgcgtggcacactggcagtacatg
gtgctgggaagcgatttctccttttctcacgtctatctctgggatgccgagaagcgggtc
ttcagccgcttcgaggactggagtgtgcgggcggcccggcgttttcagatggtgtccatc
gatggcatgcacttggtgctggctcccagcttcaaagggaacaccatcatctacaggcac
atggtgatcgacaccagcgcttag
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