Rhincodon typus (whale shark): 109920661
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Entry
109920661 CDS
T06055
Name
(RefSeq) transmembrane channel-like protein 5
KO
K21988
transmembrane channel-like protein
Organism
rtp
Rhincodon typus (whale shark)
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rtp02000
]
109920661
03037 Cilium and associated proteins [BR:
rtp03037
]
109920661
Transporters [BR:
rtp02000
]
Other transporters
Pores ion channels [TC:
1
]
109920661
Cilium and associated proteins [BR:
rtp03037
]
Other cilia and associated proteins
Stereociliary proteins
109920661
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TMC
Pex24p
Motif
Other DBs
NCBI-GeneID:
109920661
NCBI-ProteinID:
XP_048465614
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All DBs
Position
21:complement(786792..850484)
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AA seq
638 aa
AA seq
DB search
MESLRRFRENMFIYFQSVHPWKRSLKIIGGKFGTSVLSYFTFLKWLLMFNLFSFLINFSF
ITIPQFFDMGTNNVTFTGMELLTGSGYFTRTVFYYGFYTNASIQANPTAKMYNMQVAYFL
TIGCYMLSCFLYLVYSMAKSFNENFIAVGILSGDAAKLLCSWDFNITNEKAVELKKRNIS
RQLKEMLSEKMHYHRHLSTKQRILRYLIHLMAWIISLGTTFGCCFGIHSFSISNFKIIQK
NPTEEDLYKQASTLILPFVVAIINLFIPLFFSFLGSMERFKYPRDETYVLIIRNVVLKMS
VIGVLCYYWLVTVANTVECWETFVGQDLYRLVVTDFIFSLLGSFFGEFIRSIMGTHCCHK
LGKPEFDIPRNVLGLIYAQVLAWIGLFFAPLLPAIQIIKFFIIFHVKKVSLMMNCQPPRK
AWRASHMTTIFIFLLFFPGFLGVLCLLGVTVWKWKPSKLCGPFRGLNVPYSTISHFIAVI
QKTVYHLQWLVWCYNNLIMNPLFYFILTIIVFAIIYLYSQIIDGRKLMIKLLQEHISNEG
KDKAYLLRKLNSMKLKMESSREKFHTMKINDESIRHLEAKFEDRKPSSLNMKNMQDQDVI
SDQNTEQRSYSPNVNRNTASALALALAAKHQAEQDPNE
NT seq
1917 nt
NT seq
+upstream
nt +downstream
nt
atggagtctcttcgacgttttcgggagaatatgtttatatatttccagtcagttcatcct
tggaaaagatccctgaaaatcattggtgggaaatttggaacaagtgttctgtcctatttc
acattcctcaaatggctgcttatgttcaacctgttctccttcttgataaacttcagcttc
atcaccatcccacaattctttgatatgggcactaacaatgtcactttcacagggatggag
ctgctcactggttcaggttattttacacgaactgtgttttactatggcttttatacaaat
gcgagcattcaagcaaatcccactgccaaaatgtacaacatgcaagttgcttacttcctc
acaattggatgctacatgctgagttgctttctatatctggtttacagcatggcaaagtcg
ttcaatgaaaactttattgcagttggcatcctgagtggtgatgcagccaagctcctgtgt
tcctgggacttcaacataacaaatgagaaagcagtagaactgaaaaaaagaaacattagc
aggcagttaaaggaaatgttatcagaaaaaatgcactaccatcggcacctatcaacaaaa
cagagaatactgcgatatttaattcatctgatggcctggattatttcattaggaacaaca
tttggttgctgttttggaattcattccttttcgatctccaattttaagattattcaaaaa
aatccaacagaggaagatttatacaagcaagcttcgacattgatcttaccttttgtggtg
gcaattatcaatctgttcatacctttattcttctccttccttggttcaatggaaagattc
aaatatccccgggatgagacgtatgttctcattataaggaacgttgtattgaaaatgtca
gtaattggagttctatgttactattggctggtgacagtagcaaacaccgtagagtgttgg
gaaacatttgttggtcaagatctgtaccgacttgtggtgactgattttatcttctcctta
ctgggttccttctttggggagttcattcgaagcatcatgggaacacattgctgccataaa
cttggaaaaccagaattcgacattccaaggaatgttttaggtttaatctatgctcaagtt
ctggcctggattggacttttctttgcacctcttttaccagcaatacaaataataaagttc
ttcattatatttcatgttaaaaaggttagcctaatgatgaattgtcagcctcctcgcaaa
gcatggcgagcttctcatatgacgaccatctttatattcctgttgttctttcctggtttc
cttggggtactttgcttgttaggagtaactgtgtggaaatggaagccttccaaactctgt
ggaccctttagaggattaaatgtgccctacagtaccatttctcacttcattgctgtgata
caaaaaacggtttatcacctgcagtggcttgtatggtgttacaataacttgattatgaac
ccactattttacttcatcttaacaattattgtgtttgctatcatctacctgtattcacaa
attatagatgggcggaaattgatgattaaacttttacaagagcacattagtaatgaagga
aaagacaaagcatatttacttcgaaagctcaacagcatgaaattaaagatggaatcttct
agagagaagtttcatacaatgaaaatcaatgatgagtctattaggcacctggaagcaaag
tttgaagacagaaaaccaagctctttgaatatgaagaacatgcaagatcaggatgttatc
agtgaccaaaatacagaacaacgaagttattctccaaatgtaaacagaaatactgccagt
gccctcgccctggctttggctgccaagcatcaggcagaacaggacccaaatgaataa
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