Rhincodon typus (whale shark): 109920667
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Entry
109920667 CDS
T06055
Name
(RefSeq) protein HIRA isoform X1
KO
K11293
protein HIRA/HIR1
Organism
rtp
Rhincodon typus (whale shark)
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rtp03036
]
109920667
Chromosome and associated proteins [BR:
rtp03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
109920667
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_CAF1B_HIR1
Hira
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_TEP1_2nd
ANAPC4_WD40
WD40_MABP1-WDR62_2nd
WDR55
EIF3I
Beta-prop_IFT140_1st
Beta-prop_WDR35_TULP_N
Beta-prop_WDR75_1st
Beta-prop_RIG_2nd
HIRA_B
Beta-prop_IFT122_1st
WD40_like
Motif
Other DBs
NCBI-GeneID:
109920667
NCBI-ProteinID:
XP_048467558
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All DBs
Position
24:complement(6810707..6894672)
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AA seq
1015 aa
AA seq
DB search
MKLLKPAWVHHNGKPIFSVDIHPDGTKFATGGQGEDSGKVVIWNMPPVVREEDEKNEAIP
KMLCQMDNHLACVNCVRWSNNGLYLASGGDDKLIMLWKRAAYIGPSNVFGSSSKLANVEQ
WRCVSILRSHTGDVMDLAWSPHDAWLSSCSIDNTVVIWNALKFPEIIATLRGHSGLVKGL
TWDPVGKYIASQADDRSLKVWRTMDWQLETNITKPFDECAGTTHVLRLSWSPDGHYLVSA
HAMNNSGPTAQIIERDGWKTNMDFVGHRKAVTVVKFNPKIFKKKPRNGSSNKPSCPYCCC
AVGSKDRSLSVWLTCLKRPLVVIHELFDKSIMDISWTLTGLGLLVCSMDGTVAFLDFSQE
ELGDPLTEEEKNMIHQKTYGKSLAITTEQQLSTTIIENPEMLKYQQQQKELQEQKNAVGS
RELMPPKVANMLNGESLEDIRKNLLKKQIETRTADGRRRITPFCIAQLDTGDFSTAFFNS
VPITGSLPGSVLSSHINQPQPSSDSNAAKSVSSKLTQDPVPAAAKSAEETPNKDGPSITS
TSTAIPTSTQLLTSPSRIEPMKALDSRFTERSKATPGTAPISSAARQSDLERSKEQVLCK
DLKLREVQESSSDSEEKIPASKISSLSKRKNDTEGEVVEKKKKGRPRKETKHTPVTTATQ
AIPSIEKEVSRVSAPLVVFKLPTPAPKKAFNIQVSTDPAMYIEVENEVPSVTGWKLSRLK
CMREGKQWDTLLTSRILTAAGSCDLVSVACEERTVSVFSASGRRLLPAILLQSPISTLHC
ASHFVMALLATATLSVWDAKKQTVLVKDESLITILSDNDTTITQSLLTHHGVPVVTLSNG
KSYCFNTSLCTWNLISDKQDSLVQCADYRSCLTSQEAMLCSGPLATVQGCGINAGRQAAR
LSSMPHVLQRGTTLAYLENQVAAAMTLKSSQEYRHWLLIYTRYLVNEGFEPRLRELCKDL
LGPVHSSSSSQWESTVLGLRKRELLKEMLPVIGQNLRFQRLFTEYQDQLDLLKDK
NT seq
3048 nt
NT seq
+upstream
nt +downstream
nt
atgaagctgctgaaacccgcttgggtccatcacaatggtaagccgatattttctgtggac
attcatcctgatggaaccaagtttgcaacaggtggacaaggagaagattcaggcaaggtt
gtcatatggaacatgccaccagttgttcgagaggaggatgaaaagaatgaagctatcccc
aaaatgctttgccaaatggataaccacttggcctgtgtgaattgtgtgcgctggtctaac
aatggattgtatctggcatcaggtggagatgacaagttgatcatgctgtggaagagagca
gcgtatattggaccaagcaatgtctttggttccagcagcaagctagctaatgtggaacaa
tggagatgcgtatctatcctcagaagtcatacaggagatgtgatggaccttgcttggtca
ccccatgatgcttggctctcctcctgcagtatagacaacactgttgttatctggaatgct
ctgaagttcccagaaatcattgcaacattacggggtcactccggcttggtgaagggcctc
acctgggatcctgttgggaaatacattgcatcccaagctgatgaccggagcttaaaagta
tggaggaccatggattggcagttggagacaaatatcactaaaccattcgatgaatgtgca
ggcacaacgcacgtactacgcttaagttggtccccggatggccattacctcgtatctgct
cacgcaatgaacaactctggccccactgcacagatcattgagcgagatggatggaaaaca
aacatggactttgttggccaccggaaggcagtgactgtagtgaaatttaatcccaaaatt
ttcaagaagaagccacgcaatgggagttccaataagccaagctgtccttattgttgctgt
gcagttgggagcaaggaccgatctctctctgtttggctgacctgcctgaagcgcccacta
gtggtaattcatgaattattcgacaagtcaatcatggatatctcctggactttgacaggg
ttgggattgctagtgtgctccatggatgggacggtagcgttcctggatttctcacaggaa
gagttgggcgatccgctaactgaggaggagaagaacatgattcatcagaagacctacggt
aaaagcctagcaatcacaactgagcagcaactatccactaccatcattgaaaatccagag
atgctaaagtaccaacagcaacagaaggaattacaggaacagaagaatgctgtaggttcc
agggaactgatgccccccaaagtggcaaatatgctgaacggagagagccttgaggatatt
cgaaagaatttattaaagaagcagattgaaactaggacagctgacggacggagaagaatc
actcccttttgcatagctcagttagacacgggggatttttcgactgctttttttaacagt
gtacccatcacggggtcacttccaggctcagtgctgtcttcacacatcaaccagccacag
ccttcctcagattctaatgctgccaagtctgtctccagcaagctaactcaggaccctgta
ccagccgctgcaaaatcagctgaggagacccccaacaaagacgggccttcaattacgagt
acgtccactgccatacctacaagcacgcaactactgacctcaccttcacggattgaacca
atgaaagctctggactcaaggttcactgaaagatccaaagcaactccgggaacagctccc
atctcttctgctgccagacagagtgacttggaaaggagtaaagaacaggtactctgtaaa
gacttgaagcttagagaggttcaggagagcagcagtgacagtgaagagaagattccagct
tccaaaatctcatcactgtcaaaacgtaagaacgacactgagggagaggttgtggaaaag
aaaaagaaaggtcgaccaaggaaagaaacaaagcacacgccagtaaccacagcaactcag
gctataccgtcaatagaaaaggaggtgtcgcgtgtctcagctcccctcgttgtatttaaa
ctcccaacgccggcaccaaagaaagcctttaatatacaggtaagcactgacccagctatg
tacatagaggtggaaaatgaagttccatcggtaacagggtggaaattaagccggttaaag
tgcatgagagaagggaaacagtgggatacactactaaccagtcgaatcctcactgctgca
ggaagctgtgaccttgtaagtgtggcttgtgaggagcggacagtctctgtgttttcagca
agtgggcgacggctgctccctgccatccttctacagtcgcccatctctacactgcattgt
gcgagccactttgtgatggctctgttggctactgctacactttctgtctgggatgcaaag
aagcagaccgtactggtgaaagacgagtctctaatcactatattatcagataacgatacc
actataacacaatcgctgcttacacaccatggtgtccccgtggtcactctgtccaatggc
aagtcgtactgcttcaacacttccctatgcacgtggaatttgatctcggataaacaggac
tcactggttcagtgtgccgattatcgcagttgtttaacttctcaggaggccatgttgtgc
tcaggtccattggctacagtgcaaggctgtgggatcaatgctggacgccaggctgccaga
ctctcctcgatgcctcatgttttacagcgagggacgacactggcttatctggaaaatcag
gttgcagctgcaatgacgctaaaatctagccaggaataccgtcactggcttctcatctac
acccgctatttagtcaatgaaggatttgagcctcgcttaagggagttgtgtaaagatttg
ctgggtcctgttcacagctcttccagtagtcagtgggagtcaactgtcctgggactgcgg
aaaagagagctgctaaaggaaatgcttcctgtgattggacagaatctccgattccagaga
ctcttcacggagtaccaggaccagctggaccttctgaaagacaagtag
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