Rhincodon typus (whale shark): 109920681
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Entry
109920681 CDS
T06055
Symbol
katnal1
Name
(RefSeq) katanin p60 ATPase-containing subunit A-like 1
KO
K07767
katanin p60 ATPase-containing subunit A1 [EC:
5.6.1.1
]
Organism
rtp
Rhincodon typus (whale shark)
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
rtp04812
]
109920681 (katnal1)
Enzymes [BR:
rtp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.1 microtubule-severing ATPase
109920681 (katnal1)
Cytoskeleton proteins [BR:
rtp04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule severing proteins
109920681 (katnal1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
KATNA1_MIT
AAA_lid_3
Vps4_C
RuvB_N
AAA_5
TIP49
AAA_33
AAA_14
Mg_chelatase
AAA_22
NPHP3_N
AAA_16
AAA_28
AAA_7
AAA_2
IstB_IS21
TsaE
nSTAND3
AAA_17
RNA_helicase
nSTAND_NTPase5
ORC-CDC6-like
AAA_24
NACHT
AAA_18
Parvo_NS1
DUF8697
PhoH
Zeta_toxin
SRPRB
MIT_ATG38
AAA_25
Motif
Other DBs
NCBI-GeneID:
109920681
NCBI-ProteinID:
XP_048454453
LinkDB
All DBs
Position
6:complement(31632048..31658351)
Genome browser
AA seq
488 aa
AA seq
DB search
MSLAEIYDNVKKGREYALLGNYDSSMVYYQGVIQQIQKHSQSIRDPALKVKWQQVRQDLV
EEYEQVKGIVNTLESFRVEKPPTDFSVPQQDESSKDPSVWPPPIPVEHRALKRQNREVKP
ARKESPVVQARGLVGRGQQAGRAEKSSGKHSGDSRTRGKDDKSRRNLQEASGDGDGKRFD
GTGYDKDLVDVLERDIISRNPNVHWDDIADLEDAKRLLREAVVLPMWMPDFFKGIRRPWK
GVLMVGPPGTGKTMLAKAVATECGTTFFNVSSSTLTSKYRGESEKLVRLLFEMARFYAPT
TIFIDEIDSICSRRGTSDEHEASRRVKSELLIQMDGVGGASDNDDPSKMVMVLAATNFPW
DIDEALRRRLEKRVYISLPTARGRAELLKINLRGVDVALGVDVTVIAEKMEGYSGADITN
VCRDASMMAMRRRIQGLSPEEIKALSKEELQMPVTMNDFELSLKKISKSVSASDLEKYAT
WMAEFGSV
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atgagtttagcagaaatttatgataatgtgaaaaaagggagggaatatgcccttctagga
aactatgattcttcaatggtttactaccaaggggtaatccagcagattcagaaacacagt
cagtcaatcagagatccagcactaaaggtgaagtggcagcaggtgcgtcaagacttagtg
gaagaatatgagcaggtcaaaggaattgttaacactttggaaagctttagagtagagaaa
ccaccaactgatttctctgtgcctcagcaagatgaatcttccaaagatcccagtgtttgg
ccacctcctattccagttgaacaccgagctttgaagcggcagaatcgtgaggttaaacct
gcgcgaaaagaatcgccagttgtccaggcaagaggacttgtgggtcgaggtcagcaggct
ggtagagccgaaaaatctagcggcaagcatagtggtgattccagaacaagaggaaaagat
gacaagagcagaagaaacctgcaagaagcatcaggagatggagatggaaaaagatttgat
ggaactggttatgataaggatttggttgatgttctggagagagatattatttccaggaat
cccaatgtccattgggatgatatagctgatttagaagatgccaagcgacttttgagagaa
gctgttgtgctaccaatgtggatgcctgacttcttcaaaggaataaggcgaccttggaag
ggtgtcttaatggtgggaccaccaggcactggcaaaaccatgctagctaaggccgtggct
acggagtgtggaacaactttctttaacgtgtcctcttccacattaacatccaagtacagg
ggagagtctgaaaagttggttcgtttgttatttgaaatggcccgattttatgctccaaca
actatatttattgatgaaattgattcaatctgtagtcgcaggggcacatctgatgagcat
gaagccagccgtagagtcaagtcagagctacttattcagatggatggtgtagggggtgct
tcagataatgatgatccttccaaaatggtaatggtattagctgctacaaatttcccatgg
gatatagatgaagctttaaggaggagactcgaaaaaagggtatacatttcattgcccaca
gcacgtgggagggcagagctattgaaaataaatctccgtggagtagatgttgcactaggt
gttgatgttacagttattgctgagaagatggaaggttattctggcgcggacatcaccaat
gtttgcagagatgcttccatgatggcaatgcgacgtcgcattcaaggcctatctccagaa
gaaatcaaagctttgtccaaagaagagttacaaatgcccgtaaccatgaatgattttgag
ttgtctctaaagaaaatctccaaatcagtttctgcttcagatcttgaaaagtatgcaacg
tggatggccgagtttggttcagtgtaa
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