Rhincodon typus (whale shark): 109921031
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Entry
109921031 CDS
T06055
Name
(RefSeq) actin-related protein 2/3 complex subunit 1A-B
KO
K05757
actin related protein 2/3 complex, subunit 1A/1B
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp04144
Endocytosis
rtp04517
IgSF CAM signaling
rtp04530
Tight junction
rtp04810
Regulation of actin cytoskeleton
rtp05100
Bacterial invasion of epithelial cells
rtp05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
109921031
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
109921031
09144 Cellular community - eukaryotes
04530 Tight junction
109921031
09142 Cell motility
04810 Regulation of actin cytoskeleton
109921031
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
109921031
05100 Bacterial invasion of epithelial cells
109921031
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rtp04131
]
109921031
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
rtp04812
]
109921031
Membrane trafficking [BR:
rtp04131
]
Others
Actin-binding proteins
Arp2/3 complex
109921031
Cytoskeleton proteins [BR:
rtp04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Arp2/3 complex
109921031
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_THOC3
Beta-prop_EML_2
WD40
Beta-prop_WDR3_1st
WD40_WDHD1_1st
Beta-prop_WDR5
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_RIG_2nd
ANAPC4_WD40
Beta-prop_WDR35_TULP_N
WDR55
Beta-prop_CAF1B_HIR1
Beta-prop_Aladin
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR19_1st
Beta-prop_IFT140_1st
Beta-prop_EML
WD40_Gbeta
Beta-prop_WDR3_2nd
Beta-prop_WDR75_1st
Beta-prop_TEP1_2nd
Beta-prop_HPS5
EIF3I
Beta-prop_EIPR1
Rax2
Beta-prop_SPT8
Beta-prop_WDR75_2nd
PEP5_VPS11_N
Motif
Other DBs
NCBI-GeneID:
109921031
NCBI-ProteinID:
XP_048465575
LinkDB
All DBs
Position
21:complement(40149411..40180269)
Genome browser
AA seq
370 aa
AA seq
DB search
MSRHQFLFEPITCHAWNQDRTQIALSPNNHEVHIYKKSGNQWIKNHELKEHNGRITGIDW
APQSDRIVTCGADRNAYVWSQKDGVWKPTLVILRINRAATFVKWSPQENKFAVGSGARLI
SVCYFEGENDWWVSKHIKKPIRSTILSLDWHPNNVLLAAGSCDFKCRVFSAYIKEVDTKP
SATPWGSKMPFGQMMAEFGGAGSGGWVHSVSFSATGNRLAWVSHDSTVSVVDAARNMSVS
QTKTEFLPLLSVIFVSENNIVAAGHDCCPMLFMYDDRGSLTYISKLDIPKQSIQRNMSAM
QRFHNLDRRATTEDRNTTLETLHQNSITQVSLYEGDKRDCRKFCTTGIDGAMTIWDLKSL
ESSIQGVRIM
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
atgtctcgtcatcaattcttgtttgagccaatcacatgccatgcctggaatcaagatcgg
acacagatagcacttagccccaataaccatgaggttcatatttataagaaaagtggaaac
cagtggatcaagaatcatgaactgaaggagcataatggtcgaataacaggcattgactgg
gctccccagagtgatcgcattgtaacctgtggtgctgaccgtaatgcttatgtatggagt
cagaaagacggcgtgtggaagcctacgttggtcattctaagaattaaccgtgctgcaaca
tttgtgaagtggtcgcctcaggaaaataagttcgctgtaggtagtggtgctcggctgatc
tccgtgtgctactttgaaggagaaaatgattggtgggtgagtaaacacatcaagaagcca
attcgttctactatccttagccttgactggcatcccaataatgtcttactggcagcaggc
tcgtgtgacttcaaatgcagagttttttctgcttacatcaaagaagtagacacaaagcct
tctgccacaccctggggttccaaaatgccttttggacaaatgatggcagaatttgggggt
gccggtagtggtggttgggtccacagtgtttctttctctgccacaggaaatcgcttggcg
tgggtcagccacgatagcactgtatctgttgtcgacgctgctagaaatatgtcggtttct
caaacgaagaccgaatttctccccctcttgagtgtgatttttgtctctgagaataacata
gtggcagcaggccatgattgctgtccgatgctgttcatgtatgatgatcgtggttctttg
acctacatctccaagctagacattccaaagcagagcattcagcgcaacatgtctgccatg
cagcgcttccacaatctggatagaagagcaaccacagaggatcgaaataccacgcttgag
actctccaccagaacagcatcacccaagtctcactatatgaaggtgataagcgagattgt
cggaagttttgcactactggtatcgatggcgcgatgacaatttgggatttgaagtctctg
gaatcctcaatccaaggtgtgcgaatcatgtga
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integrated database retrieval system
