Rhincodon typus (whale shark): 109921055
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Entry
109921055 CDS
T06055
Name
(RefSeq) vesicle-trafficking protein SEC22b isoform X1
KO
K08517
vesicle transport protein SEC22
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp04130
SNARE interactions in vesicular transport
rtp04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
109921055
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
109921055
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rtp04131
]
109921055
Membrane trafficking [BR:
rtp04131
]
SNARE
VAMP, Ykt6, Sec22 (R)
Sec22
109921055
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Longin
Synaptobrevin
Sec20
Motif
Other DBs
NCBI-GeneID:
109921055
NCBI-ProteinID:
XP_048458079
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All DBs
Position
10:503366..527071
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AA seq
215 aa
AA seq
DB search
MVLLTMIARVADGLPLAASMQEDEQSGRDLQHYQSQAKQLFRKLNEQSPTRCTLQAGSMT
FHYVIEKGVCYLVLCEAAYPKKLAFAYLEDLQAEFDEQHGKRVPTVSRPYSFIEFDTYIQ
KTKKSYIDSRARRNLGSINTELQDVQRIMVANIEEVLQRGEALSALDSKASSLSSLSKKY
RQDAKYLNMRSTYAKLAAVAVFSIMLIVYVRFWWL
NT seq
648 nt
NT seq
+upstream
nt +downstream
nt
atggttctcctgacgatgatcgcccgggtggcggatggcctcccgctcgcagcttccatg
caggaggatgaacagtctggacgtgacctgcaacattaccaaagccaggccaaacaattg
ttccgcaagctgaatgagcagtctcccacacgctgtacactgcaagctggatccatgacc
ttccactacgtcatagagaaaggcgtttgctatttggtcttatgtgaggcagcataccca
aagaaattggcttttgcgtatctggaagacttgcaggcagagtttgatgagcagcatggg
aagagagtaccgacagtctctcgtccttactctttcattgaatttgacacatacatccaa
aaaacaaagaaatcttacatcgacagtcgagcacgcaggaacctgggctctataaacact
gaacttcaagatgtgcagcgaataatggtggcgaatatcgaggaggtcttacagcgagga
gaggcactgtcagctttggacagcaaggccagtagcctctccagcctgtcaaagaagtac
cgacaagatgccaagtacttgaatatgcgttcaacctatgccaagctagcagcggttgca
gtcttctcaatcatgttgatcgtgtatgtacgcttctggtggctctga
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