Rhincodon typus (whale shark): 109921060
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Entry
109921060 CDS
T06055
Name
(RefSeq) GRB10-interacting GYF protein 2-like
KO
K18730
PERQ amino acid-rich with GYF domain-containing protein
Organism
rtp
Rhincodon typus (whale shark)
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rtp03019
]
109921060
Messenger RNA biogenesis [BR:
rtp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
109921060
Surveillance factors
Other surveillance factors
109921060
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GYF
GYF_2
Motif
Other DBs
NCBI-GeneID:
109921060
NCBI-ProteinID:
XP_048475995
LinkDB
All DBs
Position
45:complement(5118379..5167890)
Genome browser
AA seq
1124 aa
AA seq
DB search
MSQPAGLGRKNNWCGVFRTRTGDRRFEKPGRRDGVRVGFEEVAPTSRKQDFARSDSENWR
AIREEQNGEEEDGGWRTAGARREGERWRPPSPDGPRSAGWRDHADRRRRFDFDFRERDEE
RTYRRGRTGSGSYEDEKDNLPEWCLEDAEEEMGTFDSSGAFMSLKKGSKEPIPEEQELEF
RGVDELDERPENEYDMEFYKEPDRTENEDADKTDLPAEVCNGKISPSCSSSSPSESQAQE
VFLTVPEECEPSAHRAEPDMADSASDAQGQSKPADDAVNLGQPAQLSPATVSTLSSSSPS
SSPPYPSTVAEFAPVDNDDDDGMKRFEQEAEKMVASLHDNSLDDERFVEMMQDQRNRAAA
ALPLSHEAAMKWFYKDPQGEIQGPFTTQEMADWFQAGYFPMSLLVKRGCDEGFQPLGDVI
KMWGRVPFAPGPSPPPLLLVPYSVSHQPSNQENGQVELWSPHSPAENATLCQQGDMDQGR
LKKQRELAAALYHQLQYQQFLQLINSRQQLVQCALQQKANMTPQQQQQLVVFLQQIQALK
SRCAEQNLIPAINRSMSVPETGSLWDLPTSASQPSGCDAGSLWDSASQGPLLEQIQKLER
EKATKLKQERRDAELRNKREEDDRKRQDEIRWQEEERKRRDEDELTRRKQEEVVRFQREQ
QEEVARRQREEEDRRQEEALRRRDEEERRQMEDILRKQEKDRRQQDETRRWLEEEESRRQ
LEEEARRRLAEEEERKRKEMDLQLQRQQEMLRHRQQQEALRRLQQQQQLAHIKIPSSTSW
GQQSNSVPPLQKLEEERERHRREEQCRQQQEIMKALQQHQQQKSPGWNNLPKQSMSVKSL
LEMQQELQKQQQQRAQARAHSSMPMNNSSVWGLPGQWGSDMSSMWSMHENKNSNMSLWGD
EAVKSTGPVIRSAGLKNSRSSPSLSDSYGIPTRPSKKKTEEEEKLLKLFQGMSKTQDGFT
QWCEQMLHVLNTANNLDVPTFVSFLKEVDSPYEVHDYIRAYLGDTPEAKEFAKQFLERRA
KQKANQQRQQQQQLTKELLSLTGNLALQPDRLQDSIWGIGSNSLQSLFQGNHNSAQQSSY
ESSQAGKKKKKQKMVRADPSILGFSVNASSERLNMGEIETMDDF
NT seq
3375 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcaacctgccggactcggtaggaaaaacaactggtgtggcgtctttcgtacacga
acaggtgacagaagatttgaaaaacctggacgtagagatggagtacgggtagggtttgag
gaagtagctcccacgtcacgcaagcaggattttgcacgttccgacagcgagaattggcga
gccattcgagaagaacaaaatggtgaagaggaagacggaggctggaggacagccggagca
agaagagaaggcgagaggtggcggcccccgagtccagatggtcctcgctcggcaggctgg
agggaccatgctgatcggcggcggcggtttgactttgacttccgggaacgagatgaggag
cgtacctacagaaggggcagaacaggtagtggaagctacgaggatgagaaggataattta
cccgagtggtgcctagaagatgcagaagaggaaatggggacatttgattcatctggagct
ttcatgtcattaaagaaaggttccaaagaaccaattcctgaagagcaggagctggaattt
cgaggagtagatgagttggatgaacgacctgaaaatgaatatgatatggaattctataaa
gagcctgataggaccgaaaatgaggatgcagacaaaacagatcttccagctgaggtctgc
aatggcaaaatatcgccatcatgctcgtcatcctctccatcagagtcacaggcccaggag
gtgtttctcacggtaccagaagagtgtgaacccagtgcgcacagggcagaacctgacatg
gcagactctgcatcagatgctcaaggacagagcaaacctgctgatgatgctgtgaatctg
ggccaacctgctcagctaagccctgcaacagtgtccacattatcatcgtcctcgccttcc
tcttctcctccctatcccagcaccgttgccgaattcgcaccagtggacaatgacgacgac
gacgggatgaaacgttttgaacaggaggctgagaaaatggtggcgtcgctacacgacaac
tccctggacgatgaacgattcgtggagatgatgcaagatcagaggaaccgagctgctgct
gccttacccctctcacatgaggcagccatgaaatggttctataaggatccgcagggagag
atccaaggtccgtttacaacgcaggaaatggctgactggttccaagctggatattttccc
atgtctctcttggttaaacggggttgtgatgagggcttccagcctctgggggatgtgatt
aagatgtggggaagagtgccttttgctcctggcccctctcctccaccattgctgcttgtc
ccttactctgtaagccatcaaccaagcaaccaagagaacggacaagtggaattgtggtct
cctcacagccctgctgaaaatgctactttatgtcagcagggcgatatggaccaggggaga
ctgaaaaagcagcgggagttggcagctgccttgtaccatcagcttcagtaccagcaattt
ctgcaactcataaacagccggcagcaactagtgcagtgtgcactgcagcagaaggcaaac
atgacaccccagcaacagcagcaacttgtggtgttcctgcagcagatccaggccctcaaa
tcaaggtgcgcagagcaaaatttgattcctgctatcaacagatccatgtcagtgcctgaa
accgggtctctgtgggaccttccaacttctgcttcacagccctcgggttgtgatgcaggg
agcttgtgggattcagcatctcagggtccactgctggaacaaattcaaaaactagagcga
gagaaagctacaaaactaaagcaggagcgaagagacgctgaactcaggaataaaagggaa
gaggatgacagaaaacggcaagatgaaatccggtggcaagaggaagaacgcaaacgtcgg
gatgaggatgagctaactaggaggaagcaggaagaggtggtccgatttcagagggaacag
caggaggaggttgcccggcgccaaagggaagaagaggatcgccgacaagaggaggccctg
aggcgacgtgatgaggaagaaagacggcagatggaggacatcctccgaaagcaggagaaa
gacaggaggcagcaggatgaaacccgccggtggctggaggaagaggagagcaggcgccaa
ctggaggaggaagccaggcgcaggcttgccgaggaggaggaacggaaacgcaaggaaatg
gatctgcagcttcagcggcagcaggagatgctgcgacacaggcagcagcaagaggctctg
aggcgcttacaacagcagcagcaattagcacacataaagatcccctcttctacttcatgg
gggcagcagtccaactcggtaccaccgcttcagaagctggaggaagaaagggagcgacac
cgcagagaggagcagtgtcgtcagcaacaggagataatgaaagcccttcaacagcaccag
cagcagaagtcacctggctggaacaatctccccaagcagtcaatgtctgtcaagtcatta
ttggagatgcagcaagagctgcagaaacagcaacagcagagggcgcaggcacgagcacat
tccagtatgcctatgaacaactcatcagtgtggggattgcctggccagtgggggtctgat
atgagcagcatgtggagcatgcacgaaaataagaactctaacatgagcctttggggagac
gaagctgtgaagagcacaggccctgtgattagaagtgctggactgaagaacagcaggagt
agtccttcattgagtgactcgtatggaattcctaccagaccgagcaaaaagaagactgaa
gaggaggagaagttactgaagctgttccagggaatgagcaaaactcaggacggcttcact
cagtggtgcgagcaaatgctgcatgtccttaacacagccaataaccttgatgtacccacg
tttgtatccttccttaaagaagtggactcgccatatgaggtgcacgattacatccgtgct
tacctgggtgacaccccagaggccaaagagtttgccaagcagttcctggagcgtcgtgcc
aaacaaaaggccaaccagcaaaggcaacaacaacagcagttaacaaaggaacttctgagc
ctcactgggaacctcgctctgcagcctgacaggttacaggactccatctggggaatcggt
tcaaacagcctacagtcactcttccagggtaatcacaacagtgcacagcaatcgtcttac
gagagctcgcaagctgggaaaaagaaaaagaagcaaaagatggtgcgggctgatcctagt
atcctgggcttttctgtgaacgcgtcgtcagagcgactgaacatgggagaaatagagaca
atggatgacttttaa
DBGET
integrated database retrieval system
