Rhincodon typus (whale shark): 109921093
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Entry
109921093 CDS
T06055
Symbol
pwp1
Name
(RefSeq) periodic tryptophan protein 1 homolog
KO
K14791
periodic tryptophan protein 1
Organism
rtp
Rhincodon typus (whale shark)
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rtp03009
]
109921093 (pwp1)
Ribosome biogenesis [BR:
rtp03009
]
Eukaryotic type
90S particles
Other 90S particles
109921093 (pwp1)
Pre-60S particles
Other pre-60S particles
109921093 (pwp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40_CDC20-Fz
WD40
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
WD40_RFWD3
WD40_WDHD1_1st
EIF3I
WDR55
Beta-prop_RIG_2nd
Beta-prop_TEP1_2nd
Beta-prop_EML_2
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
WD_LRWD1
Beta-prop_WDR19_1st
Beta-prop_IFT122_1st
Beta-prop_DCAF4
Beta-prop_HPS5
Beta-prop_WDR35_TULP_N
Beta-prop_SPT8
STPPase_N
Motif
Other DBs
NCBI-GeneID:
109921093
NCBI-ProteinID:
XP_048463922
LinkDB
All DBs
Position
18:complement(44373507..44415529)
Genome browser
AA seq
494 aa
AA seq
DB search
MSSLRPCVSWVPRGVAKETPDKVNLSKEELQQLILDAREEFDDQKEDEEQAEEGGNEEEL
MDATDNPASGDSKTQEEGEEEEDNDSLAEYDLDQYDEEEGGVNLGDTLGGLTVYASNEDD
PYVTLKNTDQYEDEDFKIKPTDNLIIVGKAERDCCSLEIYVHNQEEQSLYVHHDVLLPAY
PLCAEWLNFDPNPEKLTGNYAAVGNMTPVIDVWDLDAVDCLEPVFSLGNKKTKKKKQGKK
SAEIREEGHTDAVLDLSWNKNVRSVLASASADKSVILWDMLQKKPVTNLSSHTDKVQTVC
WHPFEAQTLLSGSFDKSARLYDCRNPKENCRTWRFSGEVERVKWNHFSPCNFLASTEDGF
VYCLDARSDKPLFTLKAHDGEVTGLELSSQIQGCLVTSSSDKHVKVWDILGNKPSLVHSR
DMKMGVVFCAACCPDSPFLYCFGGQKGGLRMWDISSVSAVNTAFGSRERLQVAAPWRSSV
TSSVTSSTTVQMES
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcctcaggccttgtgtgagctgggtcccccgcggtgtggccaaggaaacccca
gataaggtgaatctgagtaaggaggagttgcagcaattaatcctcgatgcaagagaagaa
tttgatgatcagaaggaagacgaagaacaggcagaggaaggagggaatgaggaggagttg
atggatgcaacagacaatcctgcctcaggtgattccaagacccaagaggaaggagaagag
gaggaagacaatgacagcctggcagaatatgaccttgatcaatatgatgaggaggaaggt
ggtgtgaatcttggcgacactttgggaggactcacagtctacgctagcaatgaagatgat
ccatatgtcactcttaaaaatacagatcaatatgaagatgaagatttcaaaatcaagccc
actgacaatctgataattgtggggaaagctgaaagggattgctgcagcctagagatttat
gttcacaaccaagaggagcaatctctctatgttcatcatgacgtgctgcttcctgcctat
ccattgtgtgctgaatggcttaactttgatccaaacccagaaaaactaacagggaattat
gctgctgtgggtaacatgactcctgtgattgacgtgtgggatctggatgcagtcgattgt
ctggaaccagttttcagtctggggaacaagaagacaaagaagaagaagcaaggcaaaaag
agtgcagagattagggaggagggacacacggacgcagttcttgatttatcttggaacaaa
aacgtcaggtctgttctggctagtgcatctgctgataagtcagtgattctctgggatatg
ttgcagaagaaacctgtgacgaatctctcttcacatacagacaaggtgcagactgtctgc
tggcatccattcgaagcacagacgcttctctcaggatcatttgacaagtcagccagactg
tatgactgccggaatccaaaggagaactgtcgcacttggagattcagtggggaggttgaa
cgcgtgaagtggaatcatttttcaccatgtaacttcctggccagcacagaggacggtttt
gtgtactgtttggatgctcgttcagataaaccacttttcacgctgaaagctcatgatgga
gaagtaacaggtttggagctcagtagccaaatccaaggctgcctggtaacatcgtcttct
gataaacacgtgaaggtttgggacattttggggaataagcccagcttggtgcattccagg
gatatgaaaatgggtgtggtgttttgtgcagcttgttgtccagactctccatttctctat
tgttttggaggtcagaagggaggtctgcgcatgtgggacatcagcagcgtctctgcagtg
aacacggcctttggatctcgtgaaagattgcaggtagctgcaccatggaggtcatcggtt
actagctctgtgactagcagcacgacagtgcaaatggagtcttag
DBGET
integrated database retrieval system
