Rhincodon typus (whale shark): 109921125
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Entry
109921125 CDS
T06055
Name
(RefSeq) tubulin alpha-1B chain-like
KO
K07374
tubulin alpha
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp04145
Phagosome
rtp04210
Apoptosis
rtp04530
Tight junction
rtp04540
Gap junction
rtp04814
Motor proteins
rtp05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
109921125
09143 Cell growth and death
04210 Apoptosis
109921125
09144 Cellular community - eukaryotes
04530 Tight junction
109921125
04540 Gap junction
109921125
09142 Cell motility
04814 Motor proteins
109921125
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
109921125
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rtp03019
]
109921125
03036 Chromosome and associated proteins [BR:
rtp03036
]
109921125
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
rtp04812
]
109921125
04147 Exosome [BR:
rtp04147
]
109921125
Messenger RNA biogenesis [BR:
rtp03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
109921125
Chromosome and associated proteins [BR:
rtp03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Other tubulins
109921125
Cytoskeleton proteins [BR:
rtp04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulins
109921125
Exosome [BR:
rtp04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
109921125
Exosomal proteins of other body fluids (saliva and urine)
109921125
Exosomal proteins of colorectal cancer cells
109921125
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tubulin_C
Tubulin
Tubulin_3
Motif
Other DBs
NCBI-GeneID:
109921125
NCBI-ProteinID:
XP_048475849
LinkDB
All DBs
Position
44:1879419..1881759
Genome browser
AA seq
415 aa
AA seq
DB search
MPSDKTIGGGDDSFNTFFSETGAGKHIPRAVFIDLEPTVIDEVRTGTYRQLFHPEQLITG
KEDAANNYARGHCSIGKEIVDLVLDRIRKVADQCTGLQGFLIFHSFGGGTGSGFTSLLME
RLSVDYGKKSKLEFSIYPAPQISTAVVEPYNTVLVTHCTLEHSDCAFMVDNEAIYDVCRR
NLDIERPTYTNLNRLIAQVVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPL
ISAEKAYHEQLSVAEITNACFEPANQMVKCDPRQGKYMACCMLYRGDVVPKDVNASIATI
KTKRSIAFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRALCMLSNTTAISLAWTRMNLKF
DKMYAKRAFVHWYVGEGLEEGEFQDAREDMASLEKDYEEVGVDSSSLDRKAEEEE
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atgcccagtgacaagacaattggaggaggagacgactccttcaatactttcttcagtgag
actggggcaggaaaacatatcccccgtgctgtgttcatagatctagagcccactgtgatt
gatgaggtccgcaccggcacatatcgacagctgtttcaccctgagcagctcatcactggc
aaggaggatgcagctaacaactatgcccggggccactgctccatcggcaaggagattgtg
gatctggtcttggatcgcatacggaaagtggctgaccagtgcacagggctgcagggattc
ctcatcttccacagtttcgggggtggcaccggttccggcttcacttccctcctgatggag
agactctctgttgactatggcaagaaatccaagctggagttttccatttaccctgctccc
cagatctccactgcagtggttgagccatacaacacagtgcttgtcacccactgcaccctt
gagcactccgactgtgccttcatggtggacaatgaagccatttatgatgtttgtcgacga
aatctcgacattgagagaccaacctacaccaacctcaaccgtctcattgcacaggtggtg
tcgtccatcacagcatcactccggttcgacggtgccctcaatgtggacttgacagagttc
cagaccaacctggtcccctatccccgcattcacttccctctggtgacctacgcacctctc
atttccgctgagaaggcttaccatgagcaactctcagtggcagagatcactaacgcctgc
tttgaaccagccaaccagatggtgaaatgcgatccccgccagggcaagtacatggcgtgc
tgcatgctgtaccgaggagacgtggtgcccaaggatgtcaatgcttccattgccaccatc
aagaccaagcgctcgatcgcatttgttgattggtgcccaactgggttcaaggttggcatt
aactatcagcccccaactgtggtaccggggggtgacctagcgaaggtgcagcgggccctc
tgtatgctgagcaacaccactgccatttccttggcttggactcgcatgaacctcaaattc
gacaagatgtatgccaagcgagcctttgtccactggtatgtgggggagggtctggaggaa
ggggagttccaggatgcacgggaagacatggcctcactcgagaaggattatgaagaggtg
ggggtcgactcttcctcactggaccgcaaagcagaggaagaagaataa
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