Rhincodon typus (whale shark): 109921150
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Entry
109921150 CDS
T06055
Symbol
tom1l2
Name
(RefSeq) TOM1-like protein 2 isoform X1
KO
K26401
target of Myb membrane trafficking protein 1 and related proteins
Organism
rtp
Rhincodon typus (whale shark)
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rtp04131
]
109921150 (tom1l2)
Membrane trafficking [BR:
rtp04131
]
Endocytosis
Clathrin-mediated endocytosis
Others
109921150 (tom1l2)
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT associated proteins
109921150 (tom1l2)
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Ortholog
Paralog
GFIT
Motif
Pfam:
VHS
GAT
ENTH
DUF3689
Motif
Other DBs
NCBI-GeneID:
109921150
NCBI-ProteinID:
XP_048465196
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All DBs
Position
21:complement(24557802..24615398)
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AA seq
602 aa
AA seq
DB search
MYLYFAYGCVKFFNCLHIGIWLSNCPVYFESCQIQLAPDIGLYERATDGSLQTEDWGLNM
EICDIINETEEGPKDAIRALKKRLSGNKNYREVMLALTILETCVKNCGHRFHVLIANRDF
VDGVLVKIVLPKNNPPAIVQDKVLGLIQAWADAFRSSPDLTGVVHIYEELKRKGMEFPMA
DLDALSPIHTPGRCVPEVDPATNKPMPQSRQKNTLPASIPSAPSTLTAYTASQGLPAGPI
TANVEQLARLRSELDVVRGNTKVMSEMLTETVPGEENQSDFELLQELNRTCRAMQQRVVE
LLSNVTNEEITDELLHVNDELNNVFLRYERFERCRSGHKSQEVRDGVLNEVTDTDNLIDL
GPGSPAVVSPMVGNMSAPTLSSQLTGLDLGADSVSGTLSSLTNCNLDAQDSANFDMFAQI
RSSSQADQCKNVTYEDLQPIGGLGAAIDQQNAGVLNHRADNPDIEPIDKWLMTQGMIPVA
QSVLDDVEEWLSTDVKGDDVEGGVTSEAVEIFGNGGEIRAPTRCSGGSPQAVLLIKRLNK
VNTLCQREGKLTEFDKFLEERAKAAERVPNLPSVLSSNSNSPPVSAESVTKPDRSKDTLC
AL
NT seq
1809 nt
NT seq
+upstream
nt +downstream
nt
atgtatctttattttgcatatgggtgtgtaaagttcttcaactgcttacacattggaatt
tggctgtcaaattgccctgtctactttgagtcctgccagatacaacttgcgcctgacatc
ggcttgtacgaacgtgctacagatggatccctgcagactgaagactggggtctgaacatg
gaaatttgtgatattattaatgagactgaagaagggccaaaggatgcaatcagggctctg
aaaaaaaggctgagtggaaataaaaactaccgggaagtgatgcttgctttaacgattttg
gagacgtgtgttaagaactgtggtcatcgtttccatgtccttatagccaaccgtgacttt
gttgatggtgtattagtaaaaattgtcttgcccaagaataatccaccagccattgtgcag
gataaagtcctgggacttatacaagcttgggctgatgctttcagaagtagtcctgatctg
actggagtagttcatatttatgaagagttgaagagaaaagggatggagtttccaatggca
gacctggatgcactgtctccaattcacacaccaggcagatgcgttcctgaggtagatcct
gcaacgaacaaaccaatgcctcagtcccgacagaaaaacactttgccagccagcatacca
tcagcaccgtccacactgactgcctatacagcctctcaaggccttccagctggaccaatc
actgcaaacgttgaacagcttgccaggttgcgcagcgagttggacgttgtccgtggaaat
accaaagttatgtccgaaatgttgacagaaacagtccctggagaggaaaatcaatcggac
ttcgagttgctgcaggaactaaatcgtacatgtcgagcaatgcagcaacgagttgtagaa
cttctttccaatgtaactaatgaagagatcactgacgaacttttgcatgtaaatgatgaa
ctcaataatgtttttcttcgatatgaaagatttgagcgatgccgatcaggacataaaagt
caggaagtaagagatggtgtattgaatgaagttacagacacagataatctaatagatttg
ggcccagggtcccctgcagttgtgagcccaatggttggaaatatgagtgctcctactttg
tcctcacagctcactgggctggacctgggagcagacagtgttagtggcactcttagctca
ttgaccaactgcaatctggatgctcaagattcagctaattttgatatgtttgcacagatc
agaagcagctctcaggctgatcagtgcaaaaatgtaacatacgaagacttgcagccaatt
ggaggattgggagctgccattgatcaacaaaatgcaggagtgttgaaccatagagctgac
aacccagacatcgagcctatagacaagtggctcatgactcaaggaatgattcctgttgca
cagtctgttttggacgacgttgaagaatggctcagcactgatgtgaagggagatgatgta
gaaggaggagtaacgagtgaagccgtagaaatattcggtaatggtggagagattagagca
ccaacacgctgctctggtggttctccacaggctgtactgttgataaagagactaaacaaa
gtcaacacactttgtcaaagggaaggaaaactgacagaatttgataaatttttggaagaa
agagcaaaagcagcagaaagagtcccaaacctgccttctgtcctgagtagcaactccaat
tctcctccagtgtctgctgaaagtgtaacaaaaccggaccgttccaaggataccctctgt
gctttataa
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