Rhincodon typus (whale shark): 109921188
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Entry
109921188 CDS
T06055
Symbol
cbll1
Name
(RefSeq) E3 ubiquitin-protein ligase Hakai isoform X1
KO
K15685
E3 ubiquitin-protein ligase Hakai [EC:
2.3.2.27
]
Organism
rtp
Rhincodon typus (whale shark)
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rtp03019
]
109921188 (cbll1)
04131 Membrane trafficking [BR:
rtp04131
]
109921188 (cbll1)
04121 Ubiquitin system [BR:
rtp04121
]
109921188 (cbll1)
Enzymes [BR:
rtp01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
109921188 (cbll1)
Messenger RNA biogenesis [BR:
rtp03019
]
Eukaryotic type
mRNA processing factors
3' end processing
N6-methyltransferase complex
109921188 (cbll1)
Membrane trafficking [BR:
rtp04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
109921188 (cbll1)
Ubiquitin system [BR:
rtp04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
109921188 (cbll1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf_Hakai
zf-C3HC4
zf-RING_5
zf-RING_UBOX
zf-C3HC4_2
Zn_ribbon_6
zf-C3HC4_4
zf-RING_2
zf-UDP
zf-MIZ
Motif
Other DBs
NCBI-GeneID:
109921188
NCBI-ProteinID:
XP_020376818
LinkDB
All DBs
Position
22:73200..103151
Genome browser
AA seq
492 aa
AA seq
DB search
MDQDKDLQGTDGSGCLSGIDVRRRIPIKLISKQSNRNRISSRVQRNMSRNSAKSLTADEE
GFDYDDDENYECKAGEVFGSQHRLPVQFFWDFKINLLGEKDDTPIHFCDKCGLPIKIYGR
MIPCKHVFCFTCASLQEKKGDKMCPGCSDPVQRIEQCLRGSLFMCSIVQGCKRTYLSQRD
LQAHINHRHMRTGKAVIRSQPEPLHPAMAPPAEIAERFLMPQDKHHISHLPPKQHAILMP
PPPLQHVSHDHYSQTHEDIRPPPTEMPLPPPPRSVSQETFRISTVTTRKHSNLITVPIQD
DSSSTGSREPPTAAPHHHPEYQNNPVVSHPHHMLPPQQHYAPPPPPPPPISHPMPHPAQA
AANPHMVYNQAPPPPLSAAPPPINPPPGHILAPMPPYLNHPPHGPPPPQHTGPPVNTPPP
PHHYSASTIPQYSEDQGTLSPPFTQPGGHSPGIGVWPAPRGPPPPRIQVPPPQAPLPGPH
HPDQTRYRPYYQ
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atggatcaggataaagatctgcaaggcacagatggttctggatgtctgagtggcattgat
gttcgaagacgtatccccatcaagttaatctctaaacagtctaaccgaaatagaatctca
tcccgtgttcagaggaatatgagcagaaattctgcgaagtctctaactgcagatgaagaa
ggatttgactatgacgatgatgagaactatgaatgcaaagctggagaggtgtttggaagc
cagcatcgacttcctgtgcagtttttctgggattttaagataaatttgcttggagagaaa
gatgacactcccattcatttctgtgataaatgtggattaccaattaagatatatggacgc
atgatcccatgcaaacatgtgttttgcttcacctgtgcaagcttgcaagagaaaaagggt
gacaagatgtgccctgggtgtagtgacccagttcagcgcattgagcagtgcttacgaggc
tcactatttatgtgtagtattgtccagggctgcaagcggacctacctttctcagagagac
ttgcaggcccatatcaaccatcggcatatgagaactgggaaggcggtcattaggtcacaa
ccagagccactccatcctgcaatggcacccccagcagaaattgctgagcgctttctgatg
ccacaagataagcaccatatttcgcatcttcctcctaaacaacatgccatcttgatgcca
ccaccccctctgcagcatgtgtcacatgatcactacagccagacgcatgaggatattcgt
ccaccacccactgagatgcctcttcctccaccaccaaggtcagtgagtcaggaaaccttt
cgaatttcaaccgtgacaacaagaaaacacagcaatctgatcactgttcctattcaagac
gactcttcaagtacaggaagtcgcgagcccccaacagctgcacctcatcatcatcctgaa
taccagaacaatccggtggtatctcatccacatcacatgctgcctccacagcagcactat
gctcctcctcctccccctccgccaccaataagccaccccatgcctcacccagcacaggct
gctgccaacccccacatggtgtacaaccaggccccacctccacctttgtcagctgctcca
ccaccaatcaatccaccaccaggacacatcttggctccaatgccaccatatctgaaccat
ccaccccatggaccacctcctcctcagcatactggtccccctgtcaacactcctccaccc
cctcaccactactctgcctctacaataccacaatattcagaagaccaaggaacacttagt
cctccatttactcagcctggagggcacagtccaggtattggtgtttggcctgctcccaga
ggtcctcctccaccaaggattcaagtcccacctccgcaggctccattacctgggccgcat
caccctgatcagacacgatataggccgtattatcaataa
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