Rhincodon typus (whale shark): 109921191
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Entry
109921191 CDS
T06055
Symbol
htr1fa
Name
(RefSeq) 5-hydroxytryptamine receptor 1F
KO
K04153
5-hydroxytryptamine receptor 1
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp04080
Neuroactive ligand-receptor interaction
rtp04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
109921191 (htr1fa)
04082 Neuroactive ligand signaling
109921191 (htr1fa)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
rtp04030
]
109921191 (htr1fa)
G protein-coupled receptors [BR:
rtp04030
]
Rhodopsin family
Biogenic amine
Serotonin
109921191 (htr1fa)
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Gene cluster
GFIT
Motif
Pfam:
7tm_1
7TM_GPCR_Srsx
7TM_GPCR_Srx
7tm_4
Motif
Other DBs
NCBI-GeneID:
109921191
NCBI-ProteinID:
XP_048458925
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Position
11:complement(24668353..24786325)
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AA seq
370 aa
AA seq
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MDLENETFTNFTIEELTKGKTSKVLISLSLSVLTIMTTLINSLVISAIIVTRKLHHPANY
LICSLAVTDLLVAVLVMPFNIIYTVRETWVMGQVVCNIWLSVDITCCTCSILHLAAIALD
RYRAITDAVEYAQKRTPKRAGIMITVVWVISIFISMPPLFWRHQGNNKEDECLIKHEHLV
YTIYSTFGAFYIPLGLILILYYKIYRAAKTLYHKRSASKHTNEDVNGKMSSITIRSPRTP
STLCMSEKSISDPLTIEDGDKIHITAKSLNPSTSQQEKLWKRNKISGTRERKAATTLGLI
LGAFVICWLPFFLKELIVNVCESCYISPEMTDFLTWLGYLNSLINPLIYTIFNEDFKKAF
QKLVRCKMFL
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
atggatttagaaaatgaaactttcaccaactttacaatcgaagaactgacaaagggaaaa
acttccaaagtactgatatcactttcactctcagtcctaacgatcatgaccacacttatt
aattcactggtgataagtgcaatcattgtaacaagaaagcttcaccacccagcaaactat
ctaatctgctcccttgctgttactgatttacttgttgctgtccttgtgatgcccttcaat
attatttacactgtaagagagacatgggtgatgggtcaggttgtctgcaatatttggtta
agtgttgacattacatgttgcacatgctctattcttcatctggctgcaattgccctggac
agatatagggctataactgatgctgtggaatatgcacagaaaaggacacctaaacgtgct
ggaataatgatcacagttgtatgggtcatttccatctttatatcaatgcctcctttgttt
tggagacaccaaggaaataataaggaggacgagtgtcttattaagcatgagcatcttgtc
tacacaatctattctacatttggagcattttatattcccttgggtttgatcctcattctg
tactataaaatatatcgagcagctaaaacgctttatcacaaaaggagtgcaagcaagcac
accaacgaggatgtaaatggcaagatgtccagcattactatcagaagccccaggacacct
tcaacattgtgcatgtccgaaaagtccatttcagaccctttgacaattgaagatggagac
aaaatccacatcacagctaaaagtctcaaccccagcactagccaacaagaaaaattgtgg
aagagaaacaaaatctctggcacaagagaaagaaaagcagcaaccaccttgggcttaatt
ctgggagcatttgtgatatgctggttaccattctttctaaaagaactcattgtgaatgtc
tgtgaatcatgttatatttctccagagatgactgattttttgacatggttaggttacctc
aattctttaatcaatcctcttatttacacaatcttcaatgaagactttaagaaagctttt
cagaaactagtacgctgcaaaatgtttctgtga
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