Rhincodon typus (whale shark): 109921270
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Entry
109921270 CDS
T06055
Symbol
trpm5
Name
(RefSeq) transient receptor potential cation channel subfamily M member 5
KO
K04980
transient receptor potential cation channel subfamily M member 5
Organism
rtp
Rhincodon typus (whale shark)
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
rtp04040
]
109921270 (trpm5)
Ion channels [BR:
rtp04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
109921270 (trpm5)
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GFIT
Motif
Pfam:
LSDAT_euk
LSDAT_prok
Ion_trans
YhfG
Motif
Other DBs
NCBI-GeneID:
109921270
NCBI-ProteinID:
XP_048462959
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Position
17:complement(7694706..7765233)
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AA seq
1011 aa
AA seq
DB search
MKPWLRDTVRKGLVKAAQSTGAWIITSGLRAGITKHIGEAVRDHALANTCSKIKVFAIGI
SPWKIISDHEGLANVKKHCPAIYQVEETTQGPLYFLDNNHSHFILVDDATPSGTTTLWLK
LLKHISEQRTGYAGTGSIEIPVLCVLVHGHPELLQKVYQGMENSVPWLVLAGSGGIADVI
ASLMHGPLVPETVQEQLQEKFPRETFSKENILKWTKLIQNIIAKDHILTVHNSEQESSED
LDTIMLKALVKACKSQTQEAQEYLDELKLAVAWNRVDIAKSEIFNGDVEWKSCDLEEVMM
DALVNDKPEFVRLFIDNGMNMYDFLTYGRLQELYRSISQKSLLYELLLKKHEEQRLTITG
MNPTSHRDTTEKRPKFTLYEVSKVLKDFLHDACKGIFQESNPSRKHLGVRKSITELNSKL
RGQRLFVMPDLSQKLENPWRDLFLWAILQNRQEMANYFWEMGPEAVPAALAACKILKEMA
HLESDTETSQSMKKAKYDQLALDLFGQCYTNSEDRAFYLLIRKTKYWSKTTCLQLATEAD
AKSFFAHDGVQALLTKIWWGDMSTDTPIWKLLCGFWCPPLILTNLITFSAHFPSIGKSEQ
LKELDSLDTEKSFLLPDEANSDHEAKDKKRLCGGNQRREFILRRWKKFWGAPVTVFLGNV
ILYFAFLSLFAYILLVDFKPPPPIGPSMAEITLYFWVFTLALEELRQSFFTEGNTNIVKK
FKLYVEDSWNKCDMVALVLFIIGVTCRMLSVSYNAGRTTLCLDFMVFALRLIHIFAINKQ
LGPKIIIVERMMKDVFFFLFFLSVWLIAYGVATQALLHPNESRVDWIFRNVLYRPYLQIF
GQIPLDEIDEVRMVNRSCFTNQANMTNGDNLPYCINRYANWLVIMLLVIFLLVTNVLLLN
LLIAMFSYTFQLVQGNTDIFWKFQRYNLIVEYHSRPALAPPFIIISHINLLIRKIIKEPQ
HKQEHFEKHLPETLDQKLRIWESVQKENYLASLEKGKKESSTERLKKTSTK
NT seq
3036 nt
NT seq
+upstream
nt +downstream
nt
atgaaaccatggcttcgggataccgtcagaaaaggcctggtgaaagctgctcaaagcaca
ggagcttggattattacaagtggtttgcgagccggaatcaccaaacacattggggaggca
gtccgtgatcatgcgctggccaacacatgctctaagatcaaagtctttgcgataggaata
tcaccatggaaaattatttctgaccatgaaggcttagccaatgttaagaaacattgtcca
gcaatataccaggttgaggagacaacccaaggtcctctttacttcttggataacaaccat
tcccatttcatactggtggatgatgccactcctagtgggaccaccacattgtggctcaaa
ctactgaagcatatttctgaacagcggacaggatacgctggaactggcagtattgaaatt
cctgtgctctgtgttcttgtccatggtcatccagaactattgcagaaagtgtaccaaggg
atggaaaattctgttccgtggctagttctggcgggatctggaggcattgctgatgttatt
gcctcattgatgcatggacctttggttccagagactgtacaagaacaacttcaggaaaaa
ttccccagagaaaccttttcaaaggagaatattctcaaatggaccaaactgatacaaaac
ataatagccaaagaccatatcttaacagtacacaactcagaacaggagagttccgaggac
ttggacacgattatgctgaaagcccttgtcaaagcatgtaaaagtcagactcaagaagcc
caggagtatctggatgaactaaaacttgctgtagcctggaacagggtggatattgccaag
agcgagattttcaatggtgatgtggagtggaagtcatgtgacctggaagaagtaatgatg
gatgccttggttaacgacaagccagagtttgtccgactgttcattgacaatgggatgaac
atgtatgacttcctcacctatggccggctccaggaactctaccgttccatctcgcagaag
agccttctctatgagctcttactgaagaagcatgaggaacaaagacttactataactggc
atgaaccccacttcacaccgtgacacaacagagaagaggcccaagtttaccctgtatgaa
gtatctaaagtgctaaaggattttctacacgatgcatgcaaggggattttccaggaatcc
aacccctctcgcaagcatttgggtgttaggaagtcaataacagagttgaacagcaagtta
cgcgggcagaggttgtttgtgatgcctgatttaagccagaagctggaaaacccttggagg
gacctcttcttgtgggcaatcctgcagaaccgacaggaaatggctaactacttctgggaa
atgggtccggaggcagtgccggcagccctggccgcatgcaagattttgaaagaaatggct
catcttgaatcagacacggagacgtctcagagcatgaagaaggcaaaatatgatcaactg
gcactagatctgtttggccagtgttacaccaacagtgaggacagagctttttacttgctg
attcgcaagaccaagtactggagcaagaccacctgcctgcagttagcaacagaagcggat
gctaaatccttctttgcacatgatggtgttcaggcactgttgacaaaaatctggtggggt
gatatgtcaacggatactccaatctggaagttgttatgtgggttctggtgtcctcctctg
atacttaccaaccttatcaccttcagtgcacatttcccatccataggtaaatctgaacaa
ttgaaagaactggacagcttggacactgagaagtctttcctgctccccgatgaggcaaac
agcgatcatgaagcaaaggataaaaaaagactttgtggagggaaccaacggagagaattt
attttaagaagatggaagaaattctggggtgctccagtcactgtattcctggggaatgtg
atcctgtactttgcattcctgtctctcttcgcatacattttgctagtggatttcaagcct
cctcctccaattggtccttctatggcagagataacactgtacttctgggttttcactctg
gcattggaggagctgagacagagttttttcaccgaagggaatacgaacatagtgaagaaa
tttaaactgtacgtggaggactcctggaacaagtgcgacatggtggccttagtgctgttc
ataattggagtgacgtgcagaatgctatcggtctcatataatgcaggccgtacaactctg
tgcctggacttcatggtgtttgctctgcggctgatccacatctttgccatcaataaacag
ttgggtccgaagattatcattgttgaacgaatgatgaaagacgtcttcttcttcttattc
tttctgagtgtttggctgattgcttatggtgtggccactcaggctctgctgcatcccaat
gagtctcgtgtggactggatcttcaggaacgtcctttacaggccttaccttcagatattt
ggccagattcccctggatgaaatagatgaggttcggatggtcaaccgatcctgcttcact
aaccaagccaacatgacaaatggagacaacttaccctattgcattaatcgttacgcaaat
tggctggtcatcatgcttctggttatcttcctgctggtcaccaatgtacttctgttgaat
cttctgattgcaatgtttagctataccttccagcttgtccagggaaacaccgacatcttt
tggaaattccagcgctacaacctaattgtggagtatcacagcagaccagctctggcccct
cccttcatcatcatcagccacattaacctcttaattcgaaagattattaaagaaccacag
cacaagcaggagcattttgaaaaacacttgccagaaaccttggaccagaagctcagaatt
tgggagtctgtgcaaaaagagaattacctagccagtttggaaaaggggaagaaagaaagc
agcaccgaaagactgaagaagacatccaccaaatga
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