Rhincodon typus (whale shark): 109921381
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Entry
109921381 CDS
T06055
Name
(RefSeq) transient receptor potential cation channel subfamily A member 1
KO
K04984
transient receptor potential cation channel subfamily A member 1
Organism
rtp
Rhincodon typus (whale shark)
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
rtp04040
]
109921381
Ion channels [BR:
rtp04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
109921381
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Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_4
Ank_3
Ank_5
Ion_trans
Motif
Other DBs
NCBI-GeneID:
109921381
NCBI-ProteinID:
XP_048451862
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All DBs
Position
4:25778843..25858652
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AA seq
1120 aa
AA seq
DB search
MKKNAMKSLFKRGRRGNAYSTVENAHELSSQKDGNIFKLVDGGDVAQIEKLVEEDLDCLS
RMDEYKSTPLHHAAGAGLLDILTLITDHANFEVLNVIDCNGNTPLHWAAEKNQTHCTQAL
LDKGANPNILNNARMSPLHLAVSLSYNAVVKVLASHKTTELNLEGDLRNTPLMLACSRDN
AEGLSILLKHGALLCKRNSLGRFPIHEAAFSGAEKTLELLLQKGEELGNPREKHINYLDE
GLHAPLHLALLGGKIETIKICIDNGAKIDLPEKDKSTALHFACMQGAVEAVKHMLSEYEG
ENDILCLLDGIKQTPLHKAATYDYSELVEYLIEQGSDMNMTDRESRTPLLWAASNGAWNT
VNLLVNKGASINIKNCAKCNFLHLTVLQPKGLKNLSKEILQSEKVQELLNDQDIDGCTPL
HYVCKQGLTESVEKMLSLKASPYLKTVDKKSSLHFAACYGRLSTCKLLLQNLNETKLLNE
GDEKGMTPLHLATQNGHTRVVQLLLRKGALLMRDYRCWTNLHYAASGGYTQTMEILLQTN
VTLLDRVDDKGNTALHLAAREGHSHAVCLLLAKGAAITLNHDEASFFHEAIRNKRKDATL
TIIQSERLAEATQVFLHGSPMQCPVLELIEHLPDAFKVLLDRCMTESSEDRKSINFSIEY
DFRYLQCPLTLKKLAKKEENVQYAPLTALNAMIRFNRAELLNHPVCTQFLKMKWQAYGLR
AHIINMALFSLLLIPLTFLIIVSRPYAFDKERPIISNFTQGMTGPWMEYQESLLYKLCTR
TVFVMSILGVCKEIYQLLQQRLQYFLDSTNLLDWSMYVASIFFVIPWIFDVKTSIQWECG
SISAFATWVNFLLYLQRFDICGIYVVMFGEILNTLFHIMALFLFLILAFGFTFYILLYEQ
KAYGSPILSQLKILAMMLGDINYNDNFLIPYSTDKMQFPLLTFGMLIMFLLLIPILLMNL
LIGLAVGDIAEVQRTASLKRIAMQISLHTSLEEKLPYRFLNRVDQQKIVVYPNKASGSMV
EALVRNFSESQVCDPASEVKCQGIDYRKLELQLEKQKYRLKDISATMEKQNELLMLISQN
LGINFEAAEQDQETFSQHRKAKGNKKKMNIMESCASIEDI
NT seq
3363 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaaatgcaatgaaaagtcttttcaaaagagggcgcagaggtaatgcttattca
actgtagaaaatgcgcacgaattatcttcacagaaggatggaaacatatttaagctcgtt
gatggtggagatgtagcacagattgaaaagttagtggaggaagaccttgactgtctcagc
agaatggatgaatataaatcaaccccactgcaccatgctgctggagcaggtctccttgac
attttgacattgatcactgatcatgctaactttgaagttttaaatgtgattgattgtaat
ggaaacacacctttacactgggctgcagagaaaaatcaaacacattgtacccaagcttta
cttgacaaaggtgcgaacccaaatattctgaataatgcacgaatgtcacctctccatttg
gctgtctctttaagttacaatgcagtggtaaaggtattagcctcacataagactacagag
ctaaacttggaaggtgatcttcgaaatacaccattgatgttggcatgttccagagataat
gctgaaggactttctatattgttgaaacatggagcattactatgcaaaaggaatagcctg
ggacgttttcctatccatgaagctgctttttcaggtgcagagaaaacattggaattgtta
ctacagaaaggtgaggaactgggcaaccctcgtgaaaaacatataaattaccttgatgaa
ggactccatgctcctcttcatctggctttacttgggggaaaaattgagacaattaaaatc
tgcattgacaatggagcaaaaattgatttaccagagaaggataagtctactgcccttcat
tttgcctgcatgcagggggcagtagaagcagtcaaacacatgctgtctgaatatgaggga
gaaaatgatattctttgtcttctggatggcattaaacaaacaccattacacaaggctgca
acatatgactactcagaactagtggaatacttaattgaacagggatcagacatgaatatg
actgaccgtgaatcccgtactcctcttctgtgggctgcttcaaatggagcttggaatacg
gtgaaccttctggtgaataaaggagcgagtatcaacataaagaattgcgcaaaatgtaac
ttccttcatctgactgttctgcaacccaaaggtctaaaaaacctcagtaaagaaattctt
cagtctgagaaagtacaggagctgttgaacgaccaagatattgatggctgtactccactg
cactatgtgtgtaaacagggattaacagaatcagtggagaaaatgctgagcttaaaagca
tctccttatctgaaaactgtagataagaaatcatcactgcattttgcagcgtgttatggc
cgactcagcacttgtaagttattgctgcagaatttaaatgagaccaagctgttgaatgaa
ggagatgagaaaggaatgactccattgcatctggcgacacagaatggacataccagagtg
gttcaactactcctcagaaaaggagctctcctaatgagggattacagatgttggacaaac
ttacattacgctgcttctggaggatatactcagacaatggaaatattattacaaactaat
gtaacactgctcgaccgggtggatgacaaagggaacactgcccttcatttggctgctaga
gaaggacacagtcatgcagtatgtctgctcctggcaaagggagctgctataacactgaac
catgatgaagcctcttttttccatgaagcaattcgcaacaagagaaaggatgctacttta
actatcattcaaagtgaaagattggctgaggctacgcaagtgtttcttcatggctctccc
atgcaatgtcctgtactggagttaattgaacatcttccagatgctttcaaagtccttttg
gacagatgtatgacagaatcatcagaagacaggaaaagtataaacttctcaattgaatac
gatttcagatatttacaatgtccactcacacttaaaaaactcgcaaagaaggaagaaaat
gttcaatatgcacccctaacagctttaaatgctatgatacgtttcaatcgagccgagctt
ctgaatcatccagtttgtacgcagtttcttaaaatgaaatggcaagcgtatggacttagg
gcacacattataaatatggctctcttttcactgttactcataccattgacgttcctcatt
attgtgtcacgaccatatgcctttgacaaagaacgaccaatcatttccaactttactcaa
ggaatgacagggccctggatggaatatcaggaatcactattgtataaactgtgcacaaga
actgtatttgtgatgagcattcttggtgtgtgtaaggaaatttatcaattgctgcaacag
cgactgcaatactttcttgattcaaccaatctcctagactggagtatgtatgtggcatcc
attttttttgtaattccctggatttttgatgtcaaaacttcaatacaatgggagtgtggt
tctattagtgcatttgcaacatgggtgaacttcctattatacttgcaaaggttcgacatt
tgtggaatctatgttgtaatgtttggagagattttgaacaccttgtttcatattatggct
ctgtttctcttccttatcttggcatttggatttaccttctacattttgttatatgagcag
aaggcatatggaagtcctattctttcccaattgaagatacttgcaatgatgttgggagat
attaactacaatgacaacttcctgattccatatagtacagataagatgcagttcccgctt
ctcacctttggaatgttaattatgtttttgttgcttataccaatcctcctcatgaattta
ctgattggtttagcagtgggagatattgctgaagtccagagaactgcatccttaaaaagg
attgcaatgcagatttctcttcataccagtttggaggaaaaactcccctatcggttcctt
aaccgggttgaccaacagaaaatagtagtatatcctaacaaggcaagtggcagtatggtt
gaggctctggtccggaatttttcagaatcacaagtctgtgacccggcctctgaagtgaaa
tgtcagggaattgattacagaaagcttgaactgcaactggagaaacagaaatataggttg
aaggacatttcagccacaatggagaagcagaatgagcttctaatgctcattagtcaaaac
ttgggaattaattttgaggctgcagagcaggaccaagaaactttctctcaacacagaaaa
gcaaaaggcaacaagaagaagatgaacataatggaatcgtgtgctagcattgaggatata
taa
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