Rhincodon typus (whale shark): 109921405
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Entry
109921405 CDS
T06055
Symbol
farsb
Name
(RefSeq) phenylalanine--tRNA ligase beta subunit
KO
K01890
phenylalanyl-tRNA synthetase beta chain [EC:
6.1.1.20
]
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
109921405 (farsb)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
rtp01007
]
109921405 (farsb)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rtp03016
]
109921405 (farsb)
Enzymes [BR:
rtp01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
109921405 (farsb)
Amino acid related enzymes [BR:
rtp01007
]
Aminoacyl-tRNA synthetase
Class II (U)
109921405 (farsb)
Transfer RNA biogenesis [BR:
rtp03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
109921405 (farsb)
Prokaryotic type
109921405 (farsb)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
tRNA_synthFbeta
PhetRS_B1
B5
B3_4
EAD7
Glyco_hydro_77
Motif
Other DBs
NCBI-GeneID:
109921405
NCBI-ProteinID:
XP_048460363
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All DBs
Position
13:50468084..50529973
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AA seq
603 aa
AA seq
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MRVCSLWQSLPVFTMPTVSVKRDLLFEALGQAYTDEEFDALCFEFGLELDEVTSEKDIIS
REQGDGKAEGASDVILYKIDVPANRYDLLCLEGLARGLQVFKARIEAPRYTRVGPPNGDM
QKLIITKETAQVRPHAVAAVLRNIKFTKDRYDSFIELQEKLHQNICRKRALVAIGTHDLD
TVAGPFTYTAKPPSEIKFRPLNQSKKYTASEIMDLYRTDSHLRHYLHIIENKPVYPVIYD
SNGIVLSMPPIINGEHSKITLHTRNVFIECTATDRTKAKIVLDVIVTMFSEYCEKPFTVE
AAQVIYPNEETCIYPEMGYRKEILSADFINKHVGVNETPESVAKLLSRMYLKSKVIGNGE
QIEIEIPPTRADVIHPCDIVEDAAIAYGYNNIKMTVPKAYTVANQFSLNKLAELLRQDMA
AGGFTEALTFALCSQDDIAGKLGKDISETKAVHIANPKTAEFQVARTTLLSGLLKTIAAN
RKMPLPLKLFEISDVVLKDPSNDVGARNSRCLCAVYYNKNPGFEVIHGMLDRVMQLLELK
PDKENGYYIQAVEDSTFFPGRCAEIFAKGQSIGKLGVLHPDVITKFELTMPCSALEIDIE
PFL
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgtatgctcactctggcagagtctgccggttttcaccatgcccactgtcagcgtg
aagagggatttgctgtttgaagctttgggtcaagcatacactgatgaagaatttgatgca
ctatgttttgagtttggtctggaactggatgaagtgacatcggaaaaggacattataagc
agagagcagggagatggaaaagcagagggtgcatctgatgtgatactgtataaaatcgat
gttcctgctaaccgatatgatctcttatgcctggaaggattggcccgtggtttacaggtc
tttaaagccagaattgaagctccaaggtacacaagagtggggccacctaatggagacatg
cagaaattaattatcaccaaagagactgcacaagttcgcccacatgctgtagcagctgtc
ctgcgtaatattaagttcaccaaggatcgctatgacagtttcattgagctacaggagaaa
ctgcatcaaaacatctgcaggaaacgagctttggttgctattggaacccatgatctggac
accgttgcaggaccttttacctataccgcaaaaccaccttctgaaattaagttcagaccc
ttaaaccagtcaaaaaaatacactgcttcagaaataatggatctttacaggacggacagt
caccttcgccattatttgcacatcattgaaaataaaccagtttatcctgttatctatgac
agcaatggcattgttctttctatgccacctattataaatggggaacacagtaaaataaca
ctccacacacggaatgtttttattgaatgtacagcaactgatcgcacaaaagcaaaaata
gtgctggatgtgattgtcacaatgttcagtgagtactgtgagaaaccatttacagttgag
gcagctcaggtgatatatccaaatgaagaaacatgcatttacccagagatggggtataga
aaagaaattctaagcgcagattttattaacaagcatgtaggagtcaatgaaacacctgaa
tctgttgctaaactgctgagtcgaatgtacttaaaatccaaggtgatagggaatggagaa
caaatagaaattgaaattccccccacaagggcagacgtcatccatccatgtgatattgta
gaagatgcagcaatagcctatggttataacaatatcaagatgaccgttccaaaagcatac
actgtagctaatcagttctcgttgaacaaattagctgagctgctgaggcaggacatggca
gctggtggattcacggaggccttgacctttgctctgtgttctcaagatgatattgctggc
aaactgggcaaggacatatcagaaacgaaagctgtacatatagccaatcctaaaacagct
gaatttcaggtggctcgtaccacccttctctctggtctgctgaagacaattgcagccaac
agaaagatgccgctgcctctgaaattatttgaaatttctgatgttgttctgaaagatcct
tccaacgatgttggtgcaaggaactccagatgcctctgtgctgtgtactacaacaagaat
cctggctttgaggtgatccatggcatgttggaccgtgtaatgcaactgcttgaactgaaa
ccagataaagagaatggatactacattcaggctgtagaagattctactttcttcccgggt
cgatgtgctgagatctttgctaaaggtcagagcattggcaagctgggagttcttcatcct
gatgttatcaccaaatttgaactgaccatgccctgctctgctctcgaaattgacattgag
ccctttctttga
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