Rhincodon typus (whale shark): 109921408
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Entry
109921408 CDS
T06055
Symbol
vps35l
Name
(RefSeq) VPS35 endosomal protein-sorting factor-like
KO
K25731
VPS35 endosomal protein-sorting factor-like
Organism
rtp
Rhincodon typus (whale shark)
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rtp04131
]
109921408 (vps35l)
Membrane trafficking [BR:
rtp04131
]
Protein recycling
Others
Retriever complex
109921408 (vps35l)
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NCBI-GeneID:
109921408
NCBI-ProteinID:
XP_048465326
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Position
21:580558..655537
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AA seq
642 aa
AA seq
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MIRGIGDPLVAVYARAYLCKVGMEVAPHLKDNLNKNFFDFLSTFKQIHGETVQNQLAVQR
VEIPVYLTLYSPAIDWILQCIAYRAPETLLTEMMDRCKTLGNNALLLNSVMSAFRPEFIA
ARSMDFIGMIKDCEESGFPKHLLFQSLGLNLALADPPENDRLQILNEAWKVITKLKSPQD
YVNCAEVWIEYTCKHFTKREVNTVLSDVIKHLTPDRAFEDAYPQLQSIIAKVLDQFHDFA
VLFSMEKFLPFLDMFQKECVKVEVCKSIMNVFIRQQQELTRDPVILNALMHICKTMHDSV
NALTLEDEKRSLAILISGFIRMVSFGRDFEQQLSFYVEARSTFCNLEPVLIQLIHSVNQL
AMETKKVMKGNHSRKTAAFVRACAAYCFITIPSLTSIFARLNLYLLSGQIALANQCLSQA
DAFFKAAISLVAEVPKMINIDGKMRTSEGFLLEFLNNFFSTLLMVPDHPEQGVLYLVRGL
LNVIQDYIWEDHSDSKVRIYINVLHLLAAASQETYLYHVDKVDSNDNLYGSDPKFLAEIN
KLAETLIGQILDHLKTLGKDETLKRQSALALSLFNSILAHGDLQNHKLNQLTINLWNLAQ
KHGFADTKIMVRTLEHIKRQSKQPNMSHFADLTVRLPLQSRT
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
atgataagagggattggtgatccattggttgctgtctatgctagagcatatctttgcaag
gttggaatggaagtggcaccacatttgaaagacaacttgaataagaatttttttgatttc
ctctccacatttaaacaaattcatggcgaaacagttcagaaccagcttgctgtgcagcgg
gtagaaatccccgtctaccttacgctatattctcctgctatagactggattcttcaatgc
attgcatacagagcaccagagactttacttacagaaatgatggacaggtgcaagactctt
ggaaacaatgctttgctgttgaactccgtaatgtcagcatttagaccggaattcattgca
gcaagatctatggatttcattggcatgataaaggactgtgaagagtctggttttcccaag
catcttcttttccaatccttggggttaaacttggctttggctgatccccctgagaatgac
agactgcaaattcttaatgaagcttggaaggttattaccaaacttaagagtccacaggat
tatgttaactgtgctgaggtttggatagagtacacatgcaagcatttcacaaaacgggaa
gttaatactgtgttatcggatgtcattaagcatttaactccagatcgagcttttgaagat
gcttacccacagcttcaatcaatcatagcaaaagtactagatcagtttcatgactttgca
gttttattttcaatggagaagttcctccctttcctggatatgttccaaaaagagtgtgtc
aaagtggaggtctgcaaatccattatgaacgtttttattaggcaacagcaagaattgacc
cgtgaccctgtcattcttaatgctctgatgcatatttgcaagacaatgcatgattctgtc
aatgctttaacgttggaagatgaaaaacggagtttggccattctcatcagtggatttatc
agaatggtttcatttggtcgtgactttgagcagcagctaagcttttatgtggaagcccga
tcaaccttctgcaacttggagcctgtcctcatccagttgatccacagtgtgaatcagctt
gcaatggaaacaaagaaagtgatgaaaggcaatcattccagaaagacagcagcatttgta
cgggcttgtgctgcatattgtttcattacaattccatcgctgacaagtatcttcgcacgt
cttaatctctacctgctctcgggtcaaatagctcttgcaaaccagtgcctttcacaagct
gatgccttctttaaagcagcaatcagccttgttgcggaagtaccaaaaatgataaacatc
gatgggaagatgagaacttcagaaggatttcttcttgaattccttaataacttcttttcc
acattgttgatggtgcctgatcatccagagcaaggagtcttgtatttggtgagaggcctt
ttgaatgtgatccaggactacatttgggaagatcattctgattcaaaagtacgaatctac
ataaacgttttgcatttgttggctgcagcaagtcaagaaacttatctttatcatgtggat
aaagttgattccaatgataacctctatggcagtgaccccaaattcttggctgaaattaat
aaacttgctgaaactctgattggacaaatcttggaccatctcaagactcttggaaaagat
gagactttgaaacgacaaagtgccttggcattatccttgtttaacagcatactcgcccat
ggagacctgcaaaaccataaacttaatcagctgacaataaatttgtggaatcttgcccaa
aaacatgggtttgctgacaccaaaatcatggtgagaacattagaacacatcaaacgtcaa
agcaaacagccgaacatgagtcattttgcagatttaacagtaaggctcccacttcagtca
cggacctaa
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