Rhincodon typus (whale shark): 109921453
Help
Entry
109921453 CDS
T06055
Name
(RefSeq) AP-2 complex subunit alpha-2-like isoform X1
KO
K11824
AP-2 complex subunit alpha
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp04142
Lysosome biogenesis
rtp04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
109921453
04142 Lysosome biogenesis
109921453
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rtp04131
]
109921453
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rtp04147
]
109921453
Membrane trafficking [BR:
rtp04131
]
Endocytosis
Clathrin-mediated endocytosis
AP-2 complex
109921453
Exosome [BR:
rtp04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
109921453
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Adaptin_N
Alpha_adaptin_C
Alpha_adaptinC2
Cnd1
HEAT_2
RIX1
HEAT_EF3_N
SUV2_M
Motif
Other DBs
NCBI-GeneID:
109921453
NCBI-ProteinID:
XP_048463048
LinkDB
All DBs
Position
17:1705653..1794868
Genome browser
AA seq
937 aa
AA seq
DB search
MPVVSKGDGMRGLAVFISDIRNCKSKEAEIKRINKELANIRSKFKGDKTLDGYNKKKYIC
KLLFIFLLGHDIDFGHMEAVNLLSSNKYTEKQIGYLFISVLVNSNSELMHLINNALRNDL
ASRNPIFMGLALHCIANVGSREMAEAFAGEIPKILVAGDTMDSAKQSAALCLLRLYRTSP
DVVPMGEWTSRVIYLLNDQHLGVVTAATSLITVLAQKNPEEFQTSVSLAISRLSRLVSSA
SADLQDYTYYFVPAPWLSVKLLQLLQCYPPPEDPAIRGRLTECLETILNKAQEPPKSKKV
QHSNVKNAVLFEAISLIIHHDSEPNLLVRACNQLGQFLQHRETNLRYLALESMWLLASSE
FSHEAVKAHIETVINALKTERDVSVRQRAVDLLYGMCDRSNAQQIVAEMLNYLENADYSI
REEIVLKIAILAERYAVDYTWYVDTILNLIRIAGDYVSEEVWYRVIQIVVSRDHVQGYAA
KTVFEVLQAPACHENLVKVGGYILGEFGNLIAGDPRSSPLIQFSLLHSKFHLCSVPTRAL
LLSTYIKFVNLFPEIKSTIQSVLRSDSQLRNSDVELQQRAVEYLRLSCIASTDILATVLE
EMPPFPERESSILNKLKKKKESSSLANVEVVKKEQNADVNGSSEPTVLHPMPTISPSTDL
LGLGSVHLVNPALTYPSQGGLLLDIFSNVSPGVISQITSAEDSFGRFICKNNGVLFENLL
LQIGLKSDFRQNLGRMYIFYGNKTLTKFVGFTSVIIYPGNLSAKLNVQLKPVNPTLEGGA
QIQQTLNIECISDFAEVPILGIQFRHDGVLQNISVKLPITVNKFLQPTDMSSEDFFRRWK
QLNSPQQEVQQIFKAKYPMDPDVTKAKLLGFGLALLDGVDPNGANFVGTGIIHMRSIQVG
CLLRLEPNTQAQMYRLTLRASKESVSKTLCELLSEQF
NT seq
2814 nt
NT seq
+upstream
nt +downstream
nt
atgccggtcgtgtcgaaaggagacgggatgcggggtctcgctgttttcatctcggacatc
agaaactgcaaaagcaaagaagcagaaataaaacgaattaacaaagaattggcaaacatc
cggtccaagtttaaaggtgacaaaacattggatggctacaacaagaaaaaatatatctgc
aaacttctgttcatcttcctccttggtcatgacattgattttggtcacatggaggcagtt
aacctgctcagttcaaataaatatacagagaagcaaattggttacctttttatctcggtc
ttagtgaattcaaacagtgagttgatgcatttaataaacaatgccctcaggaatgacctg
gccagccgtaaccctatcttcatgggcctggccctacactgcatcgcaaatgttggaagc
agggagatggcagaagcttttgctggtgaaattccaaaaatactggttgctggggatact
atggacagtgcaaaacagagtgctgctctgtgtctactgcggttgtacaggacatctcca
gatgtggtgccaatgggagaatggacgtcacgagtcatttaccttctgaatgaccaacac
ttgggagttgtaactgcagctacaagtctgatcactgtactcgcacagaaaaatcctgaa
gagtttcaaacttctgtgtccttggcgatttcaaggttgagccggcttgtatcatctgct
tcagctgatctccaggattacacttactactttgtgccagctccttggctttcagtgaag
cttctgcagctgctgcagtgctatcccccaccagaggatcctgctattcgagggcgtcta
actgaatgtcttgaaactatcctgaacaaggcccaggagccacctaaatcaaagaaagtg
caacattcaaatgtcaagaatgcagtcctgtttgaggccattagcctcattattcaccat
gacagtgaaccgaacctccttgtccgtgcgtgtaaccagctgggtcagtttctgcagcat
cgggagaccaatctacgatacctggctctggagagcatgtggctgctggctagctctgag
ttttctcatgaggcagtgaaggcacacatcgaaacagtcatcaatgcactcaagactgag
agggatgtgagtgtgcgacagagggcagtggatctcctgtatgggatgtgtgatcgcagc
aatgcccagcagatcgtggcagaaatgctgaattatctggagaatgctgattattccatt
cgagaagaaattgtattgaaaatagcaatcctggctgagaggtacgcagtggactacaca
tggtatgtcgacaccatcttgaacctgatccgaatcgctggtgactatgttagtgaggag
gtgtggtatcgagtcattcagatcgttgtcagtcgtgatcatgtacaggggtatgcagcc
aagactgtgtttgaggtcctccaagccccagcttgccatgagaaccttgtgaaagtgggt
ggatatatcttgggagagtttggaaacctaattgctggtgatccaagatccagcccttta
atacaattcagtctgctgcattcgaagtttcacctgtgcagtgtacccacaagagctctc
ttactttccacttatatcaagtttgtgaacctgtttcctgagattaagtcgaccattcaa
agtgtgctccgcagtgacagtcagttgaggaattcagatgtagagctgcagcaaagggca
gtggagtatctcaggctcagttgtatagcgagcactgatatcctggcaactgtgttggag
gagatgccaccatttcctgagagggaatcttcaatccttaacaagctgaagaaaaagaag
gaatccagcagcttggctaatgtagaggtggtgaagaaggaacagaatgctgatgttaat
ggtagctctgaacccacagttctccaccccatgcccaccatatccccatcgactgatctt
ctgggccttggatcagtccatttggtgaacccagcccttacctatccatctcaaggtggt
ttattgttggacatattctcaaatgtgagccctggggtgatctcgcagatcaccagtgct
gaggacagttttggaaggtttatttgcaaaaataatggcgtgttatttgagaacctgctt
ttgcagattggtctgaaatctgactttagacagaatttgggtcggatgtacattttttat
ggtaacaagactttgaccaaatttgtcggttttacttcagtgattatctacccgggaaac
ctttcagccaaactgaatgttcaactcaagcctgtcaaccccacacttgaaggtggtgcc
cagattcagcagacgttaaacattgaatgtatctctgactttgccgaggtgccaatcctt
gggatccagttcagacatgacggtgtgctgcagaacatctctgttaagctgcctatcaca
gtgaacaagtttctccagcccacagatatgtcatctgaggacttctttcgacgatggaag
caactaaacagcccacagcaggaggtgcagcagatatttaaggcaaagtatccaatggat
ccagacgtgactaaagcaaagctattgggatttggtctcgcacttctggatggggtggat
cccaatggtgccaattttgtgggcactggaattattcacatgaggagcatccaggttgga
tgtttgcttcgcctggagcccaacactcaggctcagatgtatcgcctcactctgcgggct
agtaaagaatctgtatcaaagacactgtgtgaactgctgtcagaacagttttaa
DBGET
integrated database retrieval system
